Gene RoseRS_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3328 
SymbolrplJ 
ID5210305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4176955 
End bp4177515 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content58% 
IMG OID640596926 
Product50S ribosomal protein L10 
Protein accessionYP_001277639 
Protein GI148657434 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0244] Ribosomal protein L10 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.211537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACTC AGCGCAAAAT AGAAACCGTT GCCGATCTGA AGCAGCGTCT CAAACGGATG 
CAGGTGACCG TTGTGGCCGA TTATCGCGGG CTTTCGGTTG CGGATATGAC CGAACTGCGC
AAGAAGTTGC GCGAGAGCGG CGCCGAATTT GTCGTCGCAA AGAATACGTT GACGCTGATC
GCGGCGCGCG AAACGGGTCA TGAGGCGATC GAGCCGTTGC TGGCGGGACC AACGGCGCTG
GCGTTCGCAT ATGACGATGT GCCAAAGTTC GTCAAAGCGA TCAATGAGTT CAACCGCGGT
CCCAAGAAGA TCATTGTGCG CGGTGGATTG GTCGGTACGA TGCTTCTCAA CGAGAATGTG
CTCGACACCG TCGCCAGTCT GCCGACCAAA GAAGAGGTGC GCGCACAGGT GCTCGGCGGG
CTTGCTGCAC CGGTCACCGG TCTGGCAGGC ATTATCGCCG CGCCGGTCAA TGATATTGTC
AATCTGCTCG ATGCAACGTC GAAGAGCATT CTGTATGCGC TTCAGGCGCG GATCGATCAG
TTGCAGCCGT CCGCGTCGTA G
 
Protein sequence
MPTQRKIETV ADLKQRLKRM QVTVVADYRG LSVADMTELR KKLRESGAEF VVAKNTLTLI 
AARETGHEAI EPLLAGPTAL AFAYDDVPKF VKAINEFNRG PKKIIVRGGL VGTMLLNENV
LDTVASLPTK EEVRAQVLGG LAAPVTGLAG IIAAPVNDIV NLLDATSKSI LYALQARIDQ
LQPSAS