Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3328 |
Symbol | rplJ |
ID | 5210305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4176955 |
End bp | 4177515 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640596926 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001277639 |
Protein GI | 148657434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.211537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACTC AGCGCAAAAT AGAAACCGTT GCCGATCTGA AGCAGCGTCT CAAACGGATG CAGGTGACCG TTGTGGCCGA TTATCGCGGG CTTTCGGTTG CGGATATGAC CGAACTGCGC AAGAAGTTGC GCGAGAGCGG CGCCGAATTT GTCGTCGCAA AGAATACGTT GACGCTGATC GCGGCGCGCG AAACGGGTCA TGAGGCGATC GAGCCGTTGC TGGCGGGACC AACGGCGCTG GCGTTCGCAT ATGACGATGT GCCAAAGTTC GTCAAAGCGA TCAATGAGTT CAACCGCGGT CCCAAGAAGA TCATTGTGCG CGGTGGATTG GTCGGTACGA TGCTTCTCAA CGAGAATGTG CTCGACACCG TCGCCAGTCT GCCGACCAAA GAAGAGGTGC GCGCACAGGT GCTCGGCGGG CTTGCTGCAC CGGTCACCGG TCTGGCAGGC ATTATCGCCG CGCCGGTCAA TGATATTGTC AATCTGCTCG ATGCAACGTC GAAGAGCATT CTGTATGCGC TTCAGGCGCG GATCGATCAG TTGCAGCCGT CCGCGTCGTA G
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Protein sequence | MPTQRKIETV ADLKQRLKRM QVTVVADYRG LSVADMTELR KKLRESGAEF VVAKNTLTLI AARETGHEAI EPLLAGPTAL AFAYDDVPKF VKAINEFNRG PKKIIVRGGL VGTMLLNENV LDTVASLPTK EEVRAQVLGG LAAPVTGLAG IIAAPVNDIV NLLDATSKSI LYALQARIDQ LQPSAS
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