Gene RoseRS_3324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3324 
Symbol 
ID5210301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4174634 
End bp4174888 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content53% 
IMG OID640596922 
Productpreprotein translocase, SecE subunit 
Protein accessionYP_001277635 
Protein GI148657430 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00139323 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.104735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG TTAAAGACAA AGAAAAAGAG TCGCAGAATG CGCTTGTGCG CGCATTTCAA 
CAGGGTATTG TGCAACCGCT GCGCGAGTCG CGCGCAGAGA TGCGCAAAGT CGTCTGGCCC
ACGCGCGAAG AGACGATACG CCTGACAGTC GTCGTTATTC TGCTGTCGGC GATTATGAGT
GCTATCCTGT TTGCAGCAGA CGCTCTCTTC TCATGGCTGC TGCTCCTGCT GCAGAATGCG
GTTGCAAATC TATAA
 
Protein sequence
MTVVKDKEKE SQNALVRAFQ QGIVQPLRES RAEMRKVVWP TREETIRLTV VVILLSAIMS 
AILFAADALF SWLLLLLQNA VANL