Gene RoseRS_3298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3298 
Symbol 
ID5210273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4144751 
End bp4145416 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID640596894 
Productdihydroxyacetone kinase, L subunit 
Protein accessionYP_001277609 
Protein GI148657404 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2376] Dihydroxyacetone kinase 
TIGRFAM ID[TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA CCGTTGACCA TGTCATCCGC TTCATTGAGC GCGCTGCCGC GCTGATCCGT 
GACCACGCAG CCGAATTGAC GGAACTCGAT ACGGTGATTG GCGATGCAGA TCACGGCGCC
AATCTGAATC GCGGTTTCTC TGCGGTGGTC GTCAAACTCG ATACATTTCA GGAGAGCGAT
ATTGGCGCTA TCCTTGATAT GACCGGGAAG ACTCTCCTGG CAACCGTCGG CGGTGCAGCC
GGTCCGCTGT ACGGAACGGC ATTTCGGCGC GCTGGCGCGC TGCTGGCTGG ACGATCGGTT
ATTGACGGAA GGGATATTGC TGCGGCGCTC GAAGTGGCGC TCGAAGGCAT TGTGGAACGT
GGTCGGGTGC AGCGCGGCGA GAAAACGATG CTCGATGCGA TTGCACCGGG AGTTGAAACG
TTCCGCGATG CCATCATGAA CGGAAGTTCG CTCGAAGAGG CGGCGCGCTG CGCGCTTGCC
GCCGTCGAAG AAGGCATGCG CGCAACAATC CCGATGCAGG CGACCAAGGG CCGCGCAGCG
TTCCTTGGTC CGCGCAGTAT CGGGCATCAG GACCCTGGCG CAACCTCTGC ATACTATATC
GCCCGTGCAA TGGTTGGTCT CGATGACGAT CCGCCAACCG GGACGCCGGA GATGCAGAAC
CTGTAG
 
Protein sequence
MQITVDHVIR FIERAAALIR DHAAELTELD TVIGDADHGA NLNRGFSAVV VKLDTFQESD 
IGAILDMTGK TLLATVGGAA GPLYGTAFRR AGALLAGRSV IDGRDIAAAL EVALEGIVER
GRVQRGEKTM LDAIAPGVET FRDAIMNGSS LEEAARCALA AVEEGMRATI PMQATKGRAA
FLGPRSIGHQ DPGATSAYYI ARAMVGLDDD PPTGTPEMQN L