Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3298 |
Symbol | |
ID | 5210273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4144751 |
End bp | 4145416 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596894 |
Product | dihydroxyacetone kinase, L subunit |
Protein accession | YP_001277609 |
Protein GI | 148657404 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2376] Dihydroxyacetone kinase |
TIGRFAM ID | [TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCA CCGTTGACCA TGTCATCCGC TTCATTGAGC GCGCTGCCGC GCTGATCCGT GACCACGCAG CCGAATTGAC GGAACTCGAT ACGGTGATTG GCGATGCAGA TCACGGCGCC AATCTGAATC GCGGTTTCTC TGCGGTGGTC GTCAAACTCG ATACATTTCA GGAGAGCGAT ATTGGCGCTA TCCTTGATAT GACCGGGAAG ACTCTCCTGG CAACCGTCGG CGGTGCAGCC GGTCCGCTGT ACGGAACGGC ATTTCGGCGC GCTGGCGCGC TGCTGGCTGG ACGATCGGTT ATTGACGGAA GGGATATTGC TGCGGCGCTC GAAGTGGCGC TCGAAGGCAT TGTGGAACGT GGTCGGGTGC AGCGCGGCGA GAAAACGATG CTCGATGCGA TTGCACCGGG AGTTGAAACG TTCCGCGATG CCATCATGAA CGGAAGTTCG CTCGAAGAGG CGGCGCGCTG CGCGCTTGCC GCCGTCGAAG AAGGCATGCG CGCAACAATC CCGATGCAGG CGACCAAGGG CCGCGCAGCG TTCCTTGGTC CGCGCAGTAT CGGGCATCAG GACCCTGGCG CAACCTCTGC ATACTATATC GCCCGTGCAA TGGTTGGTCT CGATGACGAT CCGCCAACCG GGACGCCGGA GATGCAGAAC CTGTAG
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Protein sequence | MQITVDHVIR FIERAAALIR DHAAELTELD TVIGDADHGA NLNRGFSAVV VKLDTFQESD IGAILDMTGK TLLATVGGAA GPLYGTAFRR AGALLAGRSV IDGRDIAAAL EVALEGIVER GRVQRGEKTM LDAIAPGVET FRDAIMNGSS LEEAARCALA AVEEGMRATI PMQATKGRAA FLGPRSIGHQ DPGATSAYYI ARAMVGLDDD PPTGTPEMQN L
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