| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3268 |
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| Symbol | |
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| ID | 5210243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4119127 |
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| End bp | 4121058 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596864 |
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| Product | bifunctional photosynthetic reaction center subunit L/M |
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| Protein accession | YP_001277579 |
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| Protein GI | 148657374 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit
[TIGR01157] photosynthetic reaction center L subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0578169 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTG TGCCACGCGC GCTGCCGCTG CCGAGTGGAG AGACTCTCCC CGCTGAGGCG
ATTTCCTCCA CAGGCTCGCA GGCAGCATCC GCAGAAGTCA TTCCGTTCTC GATCATCGAG
GAGTTCTATA AGCGCCCCGG TAAGACCCTT GCGGCGCGCT TCTTTGGAGT CGATCCGTTC
GACTTCTGGA TCGGTCGCTT CTATGTCGGT CTGTTCGGCG CGATCTCGAT TGTCGGTATT
GTTCTGGGGG TCGCGTTCTA TCTGTACGAG GGTGTGGTCA ACGAGGGAAC GTTCAACATC
CTGGCGATGC GCATCGAGCC GCCGCCGGTT TCGGAAGGTT TCAATATCAG CCCTGGCAAG
CCCGGCTTCT TCTGGTTCCT GACGATGGTT TCAGCGACCA TTGCTTTCAT TGGCTGGTTG
CTGCGCCAGA TTGACATCAG CCTGAAGCTG GATATGGGCA TGGAGGTGCC GATTGCATTC
GGCGCGGTCG TGTCGTCGTG GATCACCCTC CAATGGCTGC GCCCGATTGC GATGGGCGGC
TGGGGGCACG GCTTCCCGCT CGGCATTACG CACCACCTCG ATTGGGTGTC GAACATCGGG
TATCAGTACT ACAACTTCTT CTACAACCCA TTCCATGCCA TCGGTATTAC GCTGCTCTTC
GCCTCGACGC TGTTCCTGCA CATGCACGGT TCGGCAGTGC TGAGCGAGGC GCGACGGAAT
ATCAGCGACC AGAACATCCA CGTTTTCTGG CGCAATATCC TGGGCTATAG CATCGGCGAA
ATCGGTATTC ACCGTGTCGC GTTCTGGACA GGCGCTGCAT CGGTGCTGTT CTCGAACCTG
TGCATCTTCC TGTCCGGCAC GTTTGTGAAG GACTGGAACG CTTTCTGGGG CTTCTGGGAC
AGGATGCCGA TCTGGAACGG CATCGGTCAG GGGGCACTGG CGGCGGGTCT GGCGTTGATG
GGTGTCGGGT TGGTGCTGGG GCGTGCCCGC GAGACGCCGG AGCCGGTCGA TCTACGCGAC
GAGGAGTACC GTGACGGGCT GGAAGGCACG ATTGCCAAAC CGCCAGGGCA TGTTGGCTGG
ATGCAGCGCC TGCTCGGCGA AGGGCAGGTT GGTCCGATCT ATGTCGGTCT GTGGGGCGTG
ATTTCGTTCA TCACCTTCTT CGCCAGCGCG TTTATCATCC TGGTGGATTA CGGTCGTCAG
GTCGAGTGGA ATGCAGTCAT CTACCTGCGT GAGTTCTGGA ACCTGGCGGT CTATCCCCCG
CCGACCGAGT ATGGCCTGAG CTGGAATGTG CCCTGGGACA AGGGCGGTGC ATGGCTGGCG
GCGACGTTCT TCCTGCATCT CTCGGTGCTG ACATGGTGGG CGCGTCTGTA TACACGCGCA
AAAGCCACGC GCATCGGCAC ACACCTTGCC TGGGGGTTCG CTTCAGCACT GTCGCTCTAC
TTCGTCATCT ATCTGTTCCA TCCGCTCGCG CTCGGCAACT GGAGCGCCGC ACCGGGCCAC
GGCTTCCGCG CGATCCTGGA CTGGACGAAC TATGTGAGCA TCCACTGGGG CAACTTCTAC
TACAACCCCT TCCACATGCT CTCGATCTTC TTCCTGCTCG GATCGACGCT GTTGCTGGCG
ATGCACGGGG CGACGATTGT GGCGACCTCG AAGTGGAAGT CGGAGATGGA GTTTACCGAG
ATGATGGCGG AAGGTCCCGG CACGCAGCGC GCCCAACTCT TCTGGCGCTG GGTGATGGGC
TGGAACGCCA ACTCGTACAA CATCCACATC TGGGCGTGGT GGTTCGCGGC GTTGACCGCA
ATTACCGGCG CGATAGGCCT GTTCCTGAGC GGTACGGTCA TACCCGACTG GTATACATGG
GGTGAGTCGA TCAAGATTGT GGCGCCTATG CCGCCACTTG AGTACTGGTG GCAGCAGTTT
ATCTTCCGGT AA
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| Protein sequence | MSAVPRALPL PSGETLPAEA ISSTGSQAAS AEVIPFSIIE EFYKRPGKTL AARFFGVDPF
DFWIGRFYVG LFGAISIVGI VLGVAFYLYE GVVNEGTFNI LAMRIEPPPV SEGFNISPGK
PGFFWFLTMV SATIAFIGWL LRQIDISLKL DMGMEVPIAF GAVVSSWITL QWLRPIAMGG
WGHGFPLGIT HHLDWVSNIG YQYYNFFYNP FHAIGITLLF ASTLFLHMHG SAVLSEARRN
ISDQNIHVFW RNILGYSIGE IGIHRVAFWT GAASVLFSNL CIFLSGTFVK DWNAFWGFWD
RMPIWNGIGQ GALAAGLALM GVGLVLGRAR ETPEPVDLRD EEYRDGLEGT IAKPPGHVGW
MQRLLGEGQV GPIYVGLWGV ISFITFFASA FIILVDYGRQ VEWNAVIYLR EFWNLAVYPP
PTEYGLSWNV PWDKGGAWLA ATFFLHLSVL TWWARLYTRA KATRIGTHLA WGFASALSLY
FVIYLFHPLA LGNWSAAPGH GFRAILDWTN YVSIHWGNFY YNPFHMLSIF FLLGSTLLLA
MHGATIVATS KWKSEMEFTE MMAEGPGTQR AQLFWRWVMG WNANSYNIHI WAWWFAALTA
ITGAIGLFLS GTVIPDWYTW GESIKIVAPM PPLEYWWQQF IFR
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