Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3256 |
Symbol | |
ID | 5210231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4106545 |
End bp | 4108026 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596852 |
Product | chlorophyllide reductase subunit Z |
Protein accession | YP_001277567 |
Protein GI | 148657362 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit [TIGR02014] chlorophyllide reductase subunit Z |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00694846 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCCTT CACTGATTCG CGATCTTTCC GATACGTCAG GGTATTGGGC AGCAGTGTGG ACGATGTGCA CCATGCCGGA TGTCCACGTG ATCGCCGATG CGCCGGTCGG GTGCTTCAAC CTGGTGGCGA CCGCCGTGCC CGATTACACC GATGCGGTTC CGCATATCGA GAACATGACT CCGGCGACGA TCACCGAGCA GGAAGTCGGC GGAAAGGGTA CCAGCGACAA GGTTCGCTGG ACGTATGAAA ACCTGCGCGC CAGCGGTGCG CTCGACGGCA AACAACTGAT CGTGATCTCG ACCGCCGAGA GCGAGATGAT CGGCGCTGAT CTATCGTCGG TGGTGACGAC GCTTGGCGAG GGAACGCGCT TTTACTGGAG CAATTCGCTC TCGGAAGATG AATGGTCCGG GCGCGACCGG GTGCTCCGCT GGTTGTGGGA GCAGTTTGGC GCGCCACACG CCGCCAATGT GCAACCGGCG CCGGGAACGG TCAATATCAT CGGTCCCACC TACGGTTGCT TCAACTCACC ATCAGACCTG GAAGAAGTCA AACGTCTGAT CACCGGCGCC GGCGGGCGGA TCAATCTGGT CTACCCGATG GAAGCGACGC TGGCAGACAC GCCGCGCCTG GCGGCGGCGC AGGTGAATGT GGTTATGTAC CGCGAGTTCG GCGCCGGTCT GGCGGGCATG CTCGGTCAAC CGACGCTCTA CGCGCCCTTC GGCTTGCGTG AAACGACCGG ATTTGTGCGC GAACTGGGGC GGTTGCTCGG CACGACGGAC CAGGCGGAGG CGTTCATCGC CGCCGAGAAA CGAACCACCC TGCGCGCCGT GTGGGACCTG TGGCGCGGAC CGCAGGGGGA CTGGTTCGGC ACTACCGATG TCGGCATCGT TGCAGGACGG TCGTATGCCG AAGGTCTGGC GCGCTACCTG GGGGATGAGT TGGGCATGAA GATTGCATTT GTGTCTGCCC GTCCACGCCG ACCCGACGAC CCGGACAACG ATCAGATCCG GCAGATGTTG CACCGGCGCG CGCCAGCGTT TGTCTTCGGC TCAATCAACG AAAAGATCTA CCTCTCCGAA GCGGGAGCGA AATTTGCGCG CTTCTTCATG GCGTCGTTTC CCGGTCCAAC CGTGCGGCGC GCGGTCGGGA CGCCGTTCAT GGGGTACCGT GGGGCAGTGT ATGTGGTGCA GGAAATTGTC AACGGGTTGT ACGACACGTT GTTCAACTTC CTGCCGGTTG ATCAGGCGTA CAGCATGATG CGCGGCGGCC CGCCGAAGAT CGAGTCGGCG CCGGGGAACC TGCCCTGGTC GCTCGAAGCG AAAGCAGTGC TTGACGAAGC GCTGGAGAAA CTCCCCTATA TTCCGCGCAT CTCCGCCAGC CGCCAGATGC AGATGCAGGT CGAGACGCTG GCGCGCGAAC GTGCGCTCAA GGAGATCACG CCCGACCTGG TGCGCGAGGC GCTGGCGAAC GCCGGGATGT AG
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Protein sequence | MPPSLIRDLS DTSGYWAAVW TMCTMPDVHV IADAPVGCFN LVATAVPDYT DAVPHIENMT PATITEQEVG GKGTSDKVRW TYENLRASGA LDGKQLIVIS TAESEMIGAD LSSVVTTLGE GTRFYWSNSL SEDEWSGRDR VLRWLWEQFG APHAANVQPA PGTVNIIGPT YGCFNSPSDL EEVKRLITGA GGRINLVYPM EATLADTPRL AAAQVNVVMY REFGAGLAGM LGQPTLYAPF GLRETTGFVR ELGRLLGTTD QAEAFIAAEK RTTLRAVWDL WRGPQGDWFG TTDVGIVAGR SYAEGLARYL GDELGMKIAF VSARPRRPDD PDNDQIRQML HRRAPAFVFG SINEKIYLSE AGAKFARFFM ASFPGPTVRR AVGTPFMGYR GAVYVVQEIV NGLYDTLFNF LPVDQAYSMM RGGPPKIESA PGNLPWSLEA KAVLDEALEK LPYIPRISAS RQMQMQVETL ARERALKEIT PDLVREALAN AGM
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