| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3254 |
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| Symbol | |
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| ID | 5210229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4103395 |
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| End bp | 4104768 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640596850 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_001277565 |
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| Protein GI | 148657360 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00168227 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGTTTA CACGTGGATA TGCTCTCATC ATCGGGGTTG GCAGCTACCG CTTCGCGCCG
CACCTCAACG TTCCGATCAC TGCCGCCGAT GCTGAGGCGG TGGCGACGGC GCTACGCGAC
CCGCGTTTGT GCGGCTACCC CGACGCCAAT GTGACCCTCC TCGCCAATGA GGGCGCAACC
CGCGACGGGG TGCTGGCAGC GCTGCGCACC CTCGCGCAGC GCACCACGCC CGCCGATACG
ATTCTGCTCT TCTACAGCGG TCACGGTGAG TACAGCGCCG ATGGCGTCTA TGCGCTCACC
ACCCACGACA CCCGCTTCGA TACCGGCGGT AAGGTTGTCA CCGGCGCCGC CGTCAGTCAG
ACTGACCTGA TCACCGCGCT GCGGGCAATT CCGGCTCAAC GGGTGCTGGT GCTGATCAAC
GCCTGTCACG CCGGTGAACT CTCGCCGACC CTCGGCGCCG GTCAACCGGC AGTTGTCGGG
CAGCCCTTCC CGCAGCAAAC GACCGACGCC CTGCTTGCCA CCGGCAGCGG GCGGATCATC
ATCACCGCCT GCCGCGAGCA GCAGGTCGCG TATATCGGTC CCGGTCCCCT GACGATCTTC
GCCCAGGCGC TCACCGATGG GCTGCGCGGG CAGGGGGTGA GCGGGCGCGC CGGGTTCATC
AGCGCCTTCG ACCTCTACAC CCACCTCTAT TTCGCGGTGC GCGAGGCGGT GGAGCAGCGG
GTGCCGCCAG CCTTGCGGCA GCAACACGGT CCCCAGGAGC CGGAGTTGAC GGTACTGAAG
GGGGTGGGTC CGTTTGCCGT GGCCCTCTTC CGCGGCGCAA CGCAGCCCGG CGATTTCCCC
ACCGACCACG CGCCGCCGCC GGAGACGGCG ATGCGCACGG TTGAGCCATC GCGCAGCCGT
TGGGCATTCC AGCAGATCAC CGGCGAGCGG GCGGTGAACG TTGCCGGTTC GGTCAGCAAC
AGCACGATCA TCACCGGCGA CGGCAACACC GTCGCGCAGG GTGACATCAT CCGCACCGGC
GACATCAGCG GCAGCGGGAT TGCGATTGGG CGCGGGGCGC AGGCACATGT GCAGGGGGCG
CCGCCTGCGG CCCGGTCGGT AGCCGCGCTC TTCGCACCGG TTGAGGCTGC AATTCGGCAG
CGACCTGACG ATCCGATAGT GACGAAGGAT GAATTGCTGG CGACGGTCAG ATGGATCGCC
GATGAGGTGG CTCAGGGCGC TCAGGCCAAC GAGCAGCGCC TGATCCGGTT GCTGCGTGCG
CTGGCTACCA CAGCGCCCGA CATCTTTGCG CCGGTGGTGA CGATCCTGCA AACACAGTCT
ATTTGTGCAG CGGCAGTACG GGCAGCGCTC CAGGTGCAGC GTGATGGAAA TTGA
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| Protein sequence | MAFTRGYALI IGVGSYRFAP HLNVPITAAD AEAVATALRD PRLCGYPDAN VTLLANEGAT
RDGVLAALRT LAQRTTPADT ILLFYSGHGE YSADGVYALT THDTRFDTGG KVVTGAAVSQ
TDLITALRAI PAQRVLVLIN ACHAGELSPT LGAGQPAVVG QPFPQQTTDA LLATGSGRII
ITACREQQVA YIGPGPLTIF AQALTDGLRG QGVSGRAGFI SAFDLYTHLY FAVREAVEQR
VPPALRQQHG PQEPELTVLK GVGPFAVALF RGATQPGDFP TDHAPPPETA MRTVEPSRSR
WAFQQITGER AVNVAGSVSN STIITGDGNT VAQGDIIRTG DISGSGIAIG RGAQAHVQGA
PPAARSVAAL FAPVEAAIRQ RPDDPIVTKD ELLATVRWIA DEVAQGAQAN EQRLIRLLRA
LATTAPDIFA PVVTILQTQS ICAAAVRAAL QVQRDGN
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