| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3250 |
|---|
| Symbol | |
|---|
| ID | 5210225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4095511 |
|---|
| End bp | 4096383 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640596846 |
|---|
| Product | succinyl-CoA synthetase, alpha subunit |
|---|
| Protein accession | YP_001277561 |
|---|
| Protein GI | 148657356 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0118943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000183638 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATTC TGGTCGATAA AAACACCCGT TTGCTCGTGC AGGGGATCAC CGGGCGCGAG
GGTGAGTTCC ATACGCGCCA GATGATTGCT TATGGCACGA ACGTGGTTGC AGGTGTCACG
CCGGGTCGCG GTGGGCAGAC CGCGATCGAC GGCAGGGTGC CGGTGTTCAA CACGGTGGCG
GAAGCCGTCA AACAAACCGG TGCGAATGTT TCGGTCATTT ACGTCCCGGC AGCCTTTGCG
CCGGATGCGA TGCGTGAGGC GGCGGCGGCT GGCATCCCGT TGATCGTCTG CATTACCGAA
GGCATTCCGG CGAACGACAT GGTGGCGACC TACGCCTTCA TTCGTGAACA TGGCGCGCGC
CTGATCGGAC CGAACTGCCC CGGGTTGCTG ACCCCTGGTC AGGCGAAGGT GGGGATCATT
CCGGGCAACA TCGCCACTCC CGGTCCGGTC GGGGTGGTGT CGAAGAGCGG CACACTCACC
TACGAGGCGG TCGATGCGTT GACGCGGATC GGTCTGGGGC AGACGACGAT TGTCGGGATC
GGCGGCGACC CGATCATCGG CACCTCCTTT GTCGATGTGC TGGAGATGTT CCAGGCTGAT
CCTGAGACGG CTGCAATTGT GCTGATCGGC GAAATCGGCG GGGCGGCGGA GATCGATGCC
GCGAAGTATA TCGCGGCGCA CGTCACGAAG CCGGTCGTCA GTTTCATCGC CGGGCAAACG
GCGCCGCCGG GCAAACGGAT GGGGCACGCA GGCGCGATCA TTACCGGCGG CGAAGGCACC
GCCCAGGAGA AGATCGCAGC GCTCGAAGCA GTGGGTGTGC GCGTGGCGCG CCTGCCGACC
GATATTGCTC AACTGGTCCG AGAGGTCCTG TAA
|
|---|
| Protein sequence | MSILVDKNTR LLVQGITGRE GEFHTRQMIA YGTNVVAGVT PGRGGQTAID GRVPVFNTVA
EAVKQTGANV SVIYVPAAFA PDAMREAAAA GIPLIVCITE GIPANDMVAT YAFIREHGAR
LIGPNCPGLL TPGQAKVGII PGNIATPGPV GVVSKSGTLT YEAVDALTRI GLGQTTIVGI
GGDPIIGTSF VDVLEMFQAD PETAAIVLIG EIGGAAEIDA AKYIAAHVTK PVVSFIAGQT
APPGKRMGHA GAIITGGEGT AQEKIAALEA VGVRVARLPT DIAQLVREVL
|
|---|
| |