Gene RoseRS_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3227 
Symbol 
ID5210202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4067578 
End bp4068459 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content62% 
IMG OID640596823 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_001277538 
Protein GI148657333 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGTTG GAACGTTGAA CGCTTTGATA ACAATCGGCT TCATTGGCGT TGGGCGGGCT 
GGCGGGGCGC TGGCGGCAGC GTTCCATAGC GCTGGATATC GTGTCGTTGC GCTCCACAGT
CGCAGCATTG AGCGCGCAAC TGAACTGGCG CACCAGATCG GCGCAGCAGT GGTTGAGACT
CCAGTCGCTG TCGCTCACGC AGCCGATCTG GTGTTTCTCA CCGTGTCCGA TGCTGCGGTG
ACACCTGTGT GTCGCATGAT TGCCGCAACC GGTGGATGGC GCGCCGGGCA GGGCGTCGTT
CACTGTAGCG GCGCATTCGG GCGCGAAGCA CTGGTTGATG CGGCTGCAAG CGGCGCATGG
ATCGGCGGGT TTCACCCGTT GCAAACGCTT GCCGGGGCAA AAACGGCAAC GCGTCTGCGC
GGCGCATATA TCGCTATCGA TGCCGATCCG CCGCTTGCCA CGATCCTGCA TGCGCTGGCG
CACGCAATTG GCGCAATCCC GTTCGATCTC GATGCGCGTC ATCGCGCGCT CTACCACGCT
GCTGCCGTCA TGGTCGCCAA CTATACCGTT GCGCTCTACG CCTGTGGAAC AGCCTTGCTC
GAAAACATCG GATTGCCGGA AGAAGTGCGT GCGCACGCAC TGCTGCCATT GCTGCGCGGC
GCTGTCGAAA GTCTGGAAAA CGCGCCGCCG GATGTGGCGC TGACCGGACC AATCGTGCGT
GGTGATGATG GCACGATTGC GCGTCATATC GCCGCCCTTG CGACGCATAT GCCGTCGTTG
CTGCCCCTCT ACCGCGAGTT GGGTCGTGTC ACACTCTCGC TGGCTCGTGA TATTCCCGCA
CAGCAGGCGC AGGCGCTGGC AGCGCTGCTC GATGACGGTT GA
 
Protein sequence
MKVGTLNALI TIGFIGVGRA GGALAAAFHS AGYRVVALHS RSIERATELA HQIGAAVVET 
PVAVAHAADL VFLTVSDAAV TPVCRMIAAT GGWRAGQGVV HCSGAFGREA LVDAAASGAW
IGGFHPLQTL AGAKTATRLR GAYIAIDADP PLATILHALA HAIGAIPFDL DARHRALYHA
AAVMVANYTV ALYACGTALL ENIGLPEEVR AHALLPLLRG AVESLENAPP DVALTGPIVR
GDDGTIARHI AALATHMPSL LPLYRELGRV TLSLARDIPA QQAQALAALL DDG