Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3223 |
Symbol | alaS |
ID | 5210198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 4061299 |
End bp | 4064094 |
Gene Length | 2796 bp |
Protein Length | 931 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596819 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001277534 |
Protein GI | 148657329 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACGA CATTACCACA TAGTACTTCT TCCAGACGCC TCTGTGGGGC GACATGTCTG GCAAAGGCTA TTATCGCTAT GAAAAAACTT TCCAGCGCCG CGATTCGTGA GCAGTTTTTG CGTTTCTTTG AAGAACGCGG TCACGTCCGG GTACCCAGTT CATCGCTCAT CCCTGGAAAT GATCCAACCC TGCTGTTTAC CAACTCCGGT ATGGTGCAGT TCAAGGATAC GTTCCTGGGA CTGGAGCAAC GCCCATACAC CCGCGCCACA ACGGTTCAGA AGTGTCTGCG CGTCTCGGGG AAGCACAACG ATCTCGAAGA GGTCGGTCCG TCGCCGCGTC ACCATACGTT CTTCGAGATG CTCGGCAACT TCTCCTTCGG CGATTACTTC AAATCCGAGG CGATTCCCAT GGCGTGGGAG TTGTTGACGA AGGTGTTCGA ACTCCCGGTT GAACGTTTGT GGTTTACCGT CTTCGAGGGC GACGACGAGG TGCCGCCTGA TGACGAAGCA GCGCAGTTGT GGGTTGCAGC CGGCGCCGAT CCGGACCGTG TTCTTCGCTT CGGACGCAAG GACAACTTCT GGGTGATGGC GGATACCGGT CCGTGCGGTC CGTGTTCCGA GATTACGATC TATATCGGCG ATGATCTGCG GGCGATGAGT GCGCAGGGGG TCAATTCCGA CGATCCGAAC TATGTCGAGA TCTGGAACAA TGTGTTCATG CAGTTTGAGC GCAGCACCAT GCAACCGCTC CATCGCCCGT CGGTCGATAC CGGTATGGGG CTCGAACGCA TGGCGATGGT CATGCAGGGG GTTCATTCCA CCTATGAGAC CGATCTGTTC ATTCCGCTGA TTGAGCGCCA GCTGGCGCTG CTCGGCGCGG ACGAGTCGAC CTATCGCGCG CGGGTTGCGC CCTACCGCGC CGTCGCCGAC CATAGCCGCG CGGTGGCGTT CCTGATCGCC GACGGGGTGC TTCCAGGCAA TACAGGGCGG TCGTATGTGC TGCGCCGCAT TCTGCGCCGC GCAGTCTACC AGGGTCGCAC GGTCGGCTTC GAGAAGCCAT TCCTGGCGGA GATCGTCGCA GCGGTGATCG AGCAGATGGG TGCGGTCTAT CCCGAATTGC GCGAACGCGC CGATTTTATC CTGGAAACGG TCGATCTGGA AGAACGCCAG TTCCTGCGCA CCCTTTCGGG CGGAATGAGC ATTCTGAACA GTGTTATTGA ACGGGTGCGC GCCAGCGGCA GTACGGTCAT TCCTGGCGAT GATGCATTTA CGCTCAAGGA TACCTATGGC TTTCCGCTCG ATCTGACGCA GAAAATCGCT GCCGAACACG GTTTGACCGT CGATGAGGCA GGATACGAGC GGCGCATGGA AGAACAGCGT GACCGGGGCC GTCGTGCGGC ACAGTTCAAA CGGGCAGCCG AGGCGGAAGT ATGGGCGGGG ATCGATCTGC CGCCAACCCG CTTCACCGGC TATGCGGCGG TTTCCGGCAG CGGCGTGGTG CAGGCGATTG TCGTCGCTGG CGATCAGGTC GCCGAAGCCA GCGCCGGTCA ACAGGTGCAG ATCGCGCTCG ACAGCACGCC GTTCTATGCC GAAAGCGGTG GTCAGGTCGG TGATACCGGC GTCCTGATCG GTCCGCGCGG TCGTGTCCGG GTCGAAGATG TGCAACGACC CGTGCCCGGC GTGATTGTTC ATTATGGCGT GGTCGAGAGT GGCAGCGTGA TGCTGCACGA TCCGGTCGAC GCGCACGTCG ATAGTGGGCG TCGTGCCGCT ATTATGCGCA ACCATACCGC AACCCACCTG CTCCATCGCG CCCTGCGTGA TGTGCTCGGC GAACATGCCG CGCAGGCTGG CTCACTCGTT GCGCCGGATC GCCTGCGTTT CGACTTTACG CATACGCGCC CGCTGACCCC GGAACAACTG CACGAGATCG AGCGACGCGT CAATGCCTGG ATCCGTGCCG ATACGCCGGT TGTCTGGCAG GAGTTGAGTT ATCAGGCGGC TATCGAAGCC GGCGCTATCG CGCTGTTCGG CGAAAAATAT GGCGATGTGG TGCGCATGGT CACGATTGGA TGCGTCAACG GTCATGATGC GCCTTCACCT GCTGCGCTGG CTGAACGCGA ACTGGCAGGC TTTCCGATGT GCTCGCGTGA ACTGTGCGGC GGAACCCATG TCGGGCGGAG CGGCGAGATT GGACTGTTCC GCATCATTTC GGAAAGTAGC GTCGCTGCTG GCGTGCGACG CATCGAGGCA TTGACCGGTC CTGAAGCCGA AGCGTGGGTC GATGCCCAGA TTGCAACACT CCAGGCGGTT GCCGCTCGCG TCGGAGCGCC TCAAACTCAA CTGGTCGAGC GTGTCGAGGC GTTGATCGCC GAATTGAAGC AACGTCAGCG CGCCCTCGAT GAGTTGACCG CCCGCATGGC GCGGTCCAAC CTGGAAGGGT TGCTCGCCAG CGTGCAATCG GTGGGCGACA TTCGCTTCCT GGCAGCACAG GTCGAAGCGC CCAACGCCGC GCGATTGCGC GAAATGGGCG ACTGGCTGCG CGACAAATTG GGGTCGGGCG TGGTGGTGCT GGCGACGGTA TTCGACGGCA AAGCCCAGAT TCTGGCAATG GCAACGCCCG ATCTGGCGGG GAAACGGATC CATGCTGGCA ATCTCGTGAA GGCGCTTGCG CCGATCGTCG GCGGCAGCGG CGGCGGTCGC CCCGATATGG CGCAGGCTGG CGGACGTGAT AGTGCGAAGA TACCTCAAGC GTTGGAGCAT GTTGCCGCAG TGATAGCGGC GCAGGCGGGG GTTTGA
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Protein sequence | MHTTLPHSTS SRRLCGATCL AKAIIAMKKL SSAAIREQFL RFFEERGHVR VPSSSLIPGN DPTLLFTNSG MVQFKDTFLG LEQRPYTRAT TVQKCLRVSG KHNDLEEVGP SPRHHTFFEM LGNFSFGDYF KSEAIPMAWE LLTKVFELPV ERLWFTVFEG DDEVPPDDEA AQLWVAAGAD PDRVLRFGRK DNFWVMADTG PCGPCSEITI YIGDDLRAMS AQGVNSDDPN YVEIWNNVFM QFERSTMQPL HRPSVDTGMG LERMAMVMQG VHSTYETDLF IPLIERQLAL LGADESTYRA RVAPYRAVAD HSRAVAFLIA DGVLPGNTGR SYVLRRILRR AVYQGRTVGF EKPFLAEIVA AVIEQMGAVY PELRERADFI LETVDLEERQ FLRTLSGGMS ILNSVIERVR ASGSTVIPGD DAFTLKDTYG FPLDLTQKIA AEHGLTVDEA GYERRMEEQR DRGRRAAQFK RAAEAEVWAG IDLPPTRFTG YAAVSGSGVV QAIVVAGDQV AEASAGQQVQ IALDSTPFYA ESGGQVGDTG VLIGPRGRVR VEDVQRPVPG VIVHYGVVES GSVMLHDPVD AHVDSGRRAA IMRNHTATHL LHRALRDVLG EHAAQAGSLV APDRLRFDFT HTRPLTPEQL HEIERRVNAW IRADTPVVWQ ELSYQAAIEA GAIALFGEKY GDVVRMVTIG CVNGHDAPSP AALAERELAG FPMCSRELCG GTHVGRSGEI GLFRIISESS VAAGVRRIEA LTGPEAEAWV DAQIATLQAV AARVGAPQTQ LVERVEALIA ELKQRQRALD ELTARMARSN LEGLLASVQS VGDIRFLAAQ VEAPNAARLR EMGDWLRDKL GSGVVVLATV FDGKAQILAM ATPDLAGKRI HAGNLVKALA PIVGGSGGGR PDMAQAGGRD SAKIPQALEH VAAVIAAQAG V
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