Gene RoseRS_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3222 
Symbolrho 
ID5210197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4059452 
End bp4060786 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content59% 
IMG OID640596818 
Producttranscription termination factor Rho 
Protein accessionYP_001277533 
Protein GI148657328 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.584785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAAGAA TGAGAACGAA AAATACCACC AACAATGGCG GCGAGCCGGT CGCCGAGTAC 
ACCGAACCCG TTCGCGACAA ACCGATCATC AATGTTGCCG AACTCGAGAG CAAAACGCTC
AATGATCTGC GAGAACTGGC GAAAGCGAGC GGTATTACCG GCGTCAGCAA TCTGAAAAAG
CAGGATCTGA TCTTCAAACT GCTGCAAGCG CAGACGGAAG AGGCGGGCCA TACCCTGTCC
GACGGTGTTC TCGACATTGT CGCCGATGGG TATGGTTTCT TGCGCGGTGA ACGGATGTTG
CCCGGACCAA ACGATGTCTA TGTGTCGCAA TCGCAGATTC GGCGGTTTGG GCTGCGCACT
GGTGACCGGG TTTGGGGGCA GATCCGTCCG CCGAAGGAGA GTGAGCGGTA CTACTCGCTC
CTGCGCGTCG AGTTGATCAA TGGGATGGAT CCGGAAACAG CGCGCAAACG CCCGTCGTTT
GATCAGTTGA CGCCGATCTT TCCCAACGAA CAGATCAAAC TCGAAACGGA GCCGCACCTG
CTGGCAACAC GTCTGGTTGA CCTGGTGGCG CCGATCGGTC GTGGTCAGCG CGGTCTGATC
GTGTCGCCGC CCAAAGCAGG GAAGACGTTG CTGCTCAAGG CGATTGCCAA TGGCATCACC
ACCAACTATC AGGACATTCA CCTGATGGTG CTGCTCATCG GTGAACGCCC CGAAGAAGTC
ACCGATATGC GGCGCTCGGT CAAGGGCGAT GTCATCTCGT CAACGTTCGA TGAGCCGGTC
GAAGACCATA CGAAGGTCGC CGAGATGACG CTGGAACGCG CCAAGCGACT GGTTGAAGGC
GGGCAGGACG TTGTGATCCT CATGGACTCG ATCACCCGTC TGGCGCGTGC GTACAACCTG
GATATGCCGC CGAGCGGGCG CACGCTCTCT GGCGGTATCG ATCCGGTGGC GCTCTACCCG
CCCAAGCGCT TCTTCGGCGC TGCGCGCAAT ATCGAGAATG GCGGGTCACT GACGATCATC
GCTACCTGTC TGGTCGATAC CGGCAGTCGA ATGGACGATG TGATCTATGA GGAGTTCAAA
GGCACCGGGA ATATGGAACT GCACCTCGAC CGCAAACTGG CGGAGAAGCG TGTGTTCCCG
GCAATCGACA TTACCCGCAG TGGTACGCGC CGTGAGGAAC TGTTGCTGCC GCCCGACGTG
CTGCGTCAGG TGTGGACGCT GCGTCGTATG GTCAGCATGC TCGGCGAAGG CGAGGGTACT
GAACTGGTCC TGACCCGCAT GATGAAGACG CGGAATAATG CCGAGTTCCT GGCGACGTTG
AGCAAGGCGA ATTAG
 
Protein sequence
MPRMRTKNTT NNGGEPVAEY TEPVRDKPII NVAELESKTL NDLRELAKAS GITGVSNLKK 
QDLIFKLLQA QTEEAGHTLS DGVLDIVADG YGFLRGERML PGPNDVYVSQ SQIRRFGLRT
GDRVWGQIRP PKESERYYSL LRVELINGMD PETARKRPSF DQLTPIFPNE QIKLETEPHL
LATRLVDLVA PIGRGQRGLI VSPPKAGKTL LLKAIANGIT TNYQDIHLMV LLIGERPEEV
TDMRRSVKGD VISSTFDEPV EDHTKVAEMT LERAKRLVEG GQDVVILMDS ITRLARAYNL
DMPPSGRTLS GGIDPVALYP PKRFFGAARN IENGGSLTII ATCLVDTGSR MDDVIYEEFK
GTGNMELHLD RKLAEKRVFP AIDITRSGTR REELLLPPDV LRQVWTLRRM VSMLGEGEGT
ELVLTRMMKT RNNAEFLATL SKAN