| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3211 |
|---|
| Symbol | |
|---|
| ID | 5210182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 4048685 |
|---|
| End bp | 4049320 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640596803 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001277522 |
|---|
| Protein GI | 148657317 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.050298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGACGC TGCAACCAAA AAATCCATAC ATTCGCATTG CGCTGCGACG CGCTGCCAGG
GGTACCGGCT CGTCGGACAC GTTTTTAGAC CGGAGAACCG CTGTGCAACA CCTGCCAGAC
CTGTCACGGA TACTGGGCGG CATGCGCTGG GCGCTGGTCG GAGCGATGGC GTTGCGCGCC
TATGCTTCAG AACGCCTGAC GCAGGACGTA GATATCGTGA TCCACGCTGC TGATGAACAG
GCTGCGCGGG TTGCGTTCAT CTCGGCTGGC TACCGGATTG GCGGCTCGTT GCTGATTGGT
GGATTTACCG CGCATCCGGA GGAAGGCGTC GGGTACAGCA TCGATGTGCT GGCGTTCGAC
GAACCCTGGC TGAACGAGGC GCTGGCGCAA CCGATGTATG ATCTCGCCGG TTTCCCGGTG
TTAGCGCGAC ACTTTCTGAT CCTGATGAAA CTGCAGGCAG GTCGGGCGCA GGATGTCGCC
GATATAACCC GTCTGCTGCG CCGGGCGGAT CAGACTGAAC GCGCCGTTGC GCGCGCGACG
GTGGCGACGT ATGCCCCCGA TCTGCTCGAC GATTTCGATG CGCTGGTCGT GCTGACCGAT
CTGGAGTTCG GAACCGGATC ATCGGCAGCA ACGTGA
|
|---|
| Protein sequence | MQTLQPKNPY IRIALRRAAR GTGSSDTFLD RRTAVQHLPD LSRILGGMRW ALVGAMALRA
YASERLTQDV DIVIHAADEQ AARVAFISAG YRIGGSLLIG GFTAHPEEGV GYSIDVLAFD
EPWLNEALAQ PMYDLAGFPV LARHFLILMK LQAGRAQDVA DITRLLRRAD QTERAVARAT
VATYAPDLLD DFDALVVLTD LEFGTGSSAA T
|
|---|
| |