Gene RoseRS_3209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3209 
Symbol 
ID5210180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp4046189 
End bp4047202 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content59% 
IMG OID640596801 
ProductABC transporter related 
Protein accessionYP_001277520 
Protein GI148657315 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.101264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.112036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACG ATGTTCTTGC AGAGATTGCC TGTCTGATGG ATTGGCGTCA GGAGGCGGCA 
ATGGACGAAA TTGTTGTGGA GTGTCATGAA CTGACCAGAC GCTACGGCGA CTTTGTCGCT
GTTGATAGCC TGAATCTGAC CGTGCGCAGA GGCGAGATTT TTGGGTTGTT GGGTCCGAAC
GGCGCCGGTA AAACGACGAC CATCCTGATG TTGCTTGGTT TGACCGAGCC GACGGCGGGA
AGTGTGCGGG TGCTGGGGCT GGACCCGACG CGCCAGCCGT TGAGCATCAA GGCGCGGGTT
GGCTACCTGC CCGATCAGGT TGGTTTCTAT GACGGGCTGA CTGCACGCGA GAATCTGATC
TACATTGCGA AGTTGAACGG TATTCGCGGC AGGGAGATGC AGGAACGCAT CCGTGAGTCG
CTGGAACAGG TCGGTTTGAG CGATGTCGCC GACCGGCAGG TGAGAACATT CTCACGCGGC
ATGCGGCAAC GCCTGGGTGT CGCCGAAGTG CTGCTCAAGC GCCCGCAGTT GATTGTGATG
GACGAGCCAA CGCTGGCGCT GGACCCGGAG GCAGTGCGTG AGTTTCTTGA ACTGATCCGG
CGTCTCAAAT CTGATGGGAT CACGATTATG CTCTCATCGC ACCTGCTCCA CCAGGTGCAG
GCGGTCTGCG ACCGGGTAGG GCTATTCCAC AAGGGGCGGA TGGTGCTGGA AGGAACCGTC
CACGATCTGG CGCAGCGTGT GCTTGGCGGT GCGTACCGTA TTCATCTGGA GGCTGAAGGC
GGACCCGCCG TCGAGGAAGC GCTGCGTCGT CTGCCTGACG TGATCCAGGT GGTACGTGAT
GGCGTCCAGA CCTACCACAT CGAGACGCGG AGCGATCTGC GCGCCGACGT AGCACGCAGT
GTGATCGAGG CAGGGGGAAA GGTACTGGCG CTGAGCGCCG ATATTCCGCG TCTCGATGAA
ATATATGCGC GCTATTTCCA GAAGAAAGAG GTGGCATATG CCGTCGCAGC CTGA
 
Protein sequence
MAHDVLAEIA CLMDWRQEAA MDEIVVECHE LTRRYGDFVA VDSLNLTVRR GEIFGLLGPN 
GAGKTTTILM LLGLTEPTAG SVRVLGLDPT RQPLSIKARV GYLPDQVGFY DGLTARENLI
YIAKLNGIRG REMQERIRES LEQVGLSDVA DRQVRTFSRG MRQRLGVAEV LLKRPQLIVM
DEPTLALDPE AVREFLELIR RLKSDGITIM LSSHLLHQVQ AVCDRVGLFH KGRMVLEGTV
HDLAQRVLGG AYRIHLEAEG GPAVEEALRR LPDVIQVVRD GVQTYHIETR SDLRADVARS
VIEAGGKVLA LSADIPRLDE IYARYFQKKE VAYAVAA