Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3209 |
Symbol | |
ID | 5210180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4046189 |
End bp | 4047202 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596801 |
Product | ABC transporter related |
Protein accession | YP_001277520 |
Protein GI | 148657315 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.101264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.112036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACACG ATGTTCTTGC AGAGATTGCC TGTCTGATGG ATTGGCGTCA GGAGGCGGCA ATGGACGAAA TTGTTGTGGA GTGTCATGAA CTGACCAGAC GCTACGGCGA CTTTGTCGCT GTTGATAGCC TGAATCTGAC CGTGCGCAGA GGCGAGATTT TTGGGTTGTT GGGTCCGAAC GGCGCCGGTA AAACGACGAC CATCCTGATG TTGCTTGGTT TGACCGAGCC GACGGCGGGA AGTGTGCGGG TGCTGGGGCT GGACCCGACG CGCCAGCCGT TGAGCATCAA GGCGCGGGTT GGCTACCTGC CCGATCAGGT TGGTTTCTAT GACGGGCTGA CTGCACGCGA GAATCTGATC TACATTGCGA AGTTGAACGG TATTCGCGGC AGGGAGATGC AGGAACGCAT CCGTGAGTCG CTGGAACAGG TCGGTTTGAG CGATGTCGCC GACCGGCAGG TGAGAACATT CTCACGCGGC ATGCGGCAAC GCCTGGGTGT CGCCGAAGTG CTGCTCAAGC GCCCGCAGTT GATTGTGATG GACGAGCCAA CGCTGGCGCT GGACCCGGAG GCAGTGCGTG AGTTTCTTGA ACTGATCCGG CGTCTCAAAT CTGATGGGAT CACGATTATG CTCTCATCGC ACCTGCTCCA CCAGGTGCAG GCGGTCTGCG ACCGGGTAGG GCTATTCCAC AAGGGGCGGA TGGTGCTGGA AGGAACCGTC CACGATCTGG CGCAGCGTGT GCTTGGCGGT GCGTACCGTA TTCATCTGGA GGCTGAAGGC GGACCCGCCG TCGAGGAAGC GCTGCGTCGT CTGCCTGACG TGATCCAGGT GGTACGTGAT GGCGTCCAGA CCTACCACAT CGAGACGCGG AGCGATCTGC GCGCCGACGT AGCACGCAGT GTGATCGAGG CAGGGGGAAA GGTACTGGCG CTGAGCGCCG ATATTCCGCG TCTCGATGAA ATATATGCGC GCTATTTCCA GAAGAAAGAG GTGGCATATG CCGTCGCAGC CTGA
|
Protein sequence | MAHDVLAEIA CLMDWRQEAA MDEIVVECHE LTRRYGDFVA VDSLNLTVRR GEIFGLLGPN GAGKTTTILM LLGLTEPTAG SVRVLGLDPT RQPLSIKARV GYLPDQVGFY DGLTARENLI YIAKLNGIRG REMQERIRES LEQVGLSDVA DRQVRTFSRG MRQRLGVAEV LLKRPQLIVM DEPTLALDPE AVREFLELIR RLKSDGITIM LSSHLLHQVQ AVCDRVGLFH KGRMVLEGTV HDLAQRVLGG AYRIHLEAEG GPAVEEALRR LPDVIQVVRD GVQTYHIETR SDLRADVARS VIEAGGKVLA LSADIPRLDE IYARYFQKKE VAYAVAA
|
| |