| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3201 |
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| Symbol | |
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| ID | 5210172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4027045 |
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| End bp | 4030743 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596793 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001277512 |
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| Protein GI | 148657307 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.30151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAA CGCGGCGACA CGACCGCCTC GAAGGAAAAG TGGCTCTGAT CACCGGCGGC
GCTGGTAACA TCGGCGAAGT CATTACCCGT CGATTCCTGG CAGAAGGGGC TACCGTCGTC
ATTACCGGGC GCAATGTCGA GAAACTTGCC GCTTACCGTC GCCGCCTGAT CGACGAAGAG
CGCATCGCCC CGGATCGCGT CGTGGCACTG CGGATGGACG GCAGCGATAT GGCGCAGGTG
CGCGCCGCCA TCGCGCAGAT CGTTCACGGC GGTGCGGATG TTCCAACACC CCTGAAACGC
ATCGATATCC TGGTCAACAA CGCTGGCAGC GCCGGACCGC GGCGCCGCCT GGTCGATATT
CCGCTCGAGC CATCTGAGGT GCACCCGCCA GACACCGAAA CGCTGGCGCA GGCGGTCGGA
AATCTGGTCG GCGTCGCCTG GAACCTGACC CGCGCCGCCG CCCCCTATAT GCCGCCTGGC
AGCAGCATTA TCAATGTTTC GACGATCTTT TCGCGCACCG ATTACTACGG ACGTATCGCC
TACGTTGTGC CCAAAGCGGC GCTCAATGCG TTGAGCCAGG GGCTGGCGCG CGAACTGGGG
GTGCGTGGGA TTCGGGTCAA TACCATCTAC CCCGGACCGA TCGAGAGTGA GCGGATCCAT
ACGGTATTCC AGGCGATGGA TGCCCTGAAG GGGCAACCCG AAGGCGAAAC TGCCAGAAGT
TTTCTCAGGC TTATGCGCCT GAGTCGCGCT GATACGCAGG GCGAAGTGAC AAAACGGTTC
CCGCTGCCGG TCGATGTCGC CAATACGGCC GTGTTTCTTG CCAGCGAAGA ATCGGCAGCC
TTCACCGGTC ATGCCTTTGA GGTGACCCAC GGCATGGAGG CGCCGGTCGA AAGCCGCACG
ACATTCGTGT CGCGCCCCGG TCTGCGCAGC GTTGATGCAA CCGGCAACGT CATTCTGATC
TGTGCCGGCG ATCAGGTCGA TGATGCAATT GCGCTATCTG ACACACTGCG CTCCTGTCGG
GCGACGGTGG TCGTCGGGTT CCGCGACGTG CAGGCGCTGG AAAAAGCCTC GGCATTGCTG
CGCGAACCGC GCCACGTCGC TCCAGCCGAT ATGTACGGTC GCCCGACGAT GGTCGCTGAA
ACCCGTCTGG TGCATCTCGA TCCGCTCGAC TCGCGCGCGG CTGCGCAGAC GCTTGAACGC
ATCCGCGCAG AACTGGGAAC GCTGCACCAC GCGGTCATTC TGCCCGCTTC ACTCCGCCAT
GCGCCAACCG AAAGCCTGAT CGATGTGGAT GACCGGATTA TTGACCGCTT CCTGGAGCAG
GAACTGGTTG GCGCTATCGC GCTGGCGCGC GAACTGGCGC GATTCTGGGA AGAACATCCC
GCTGGCTCGC GGGCGCATCG GGTGCTCTTC GTCAGCAACC CGGATGACCA GCAGGGGAAC
CGGTACGCCG ATATTCTGCG CGCTGCGGTC GAACAACTGG CGCGCGTCTG GCGTCACGAG
AGCGAGTACG ATGCGGCGAA CCCGGCGCAC CGGCACGAAG ATCAACCGGG CGCAGCAGTA
TGGGCGAATC AGTTGATCCG CTATGTCAAT TCAGAGTCGG CAAACCTCGA CTTTACCTGC
GCCTGGGTGG CAAAACTGCT GGGCAGCGAC CGGCGTATCG CCGAGATCAA TCTGTATCTT
CCCGAACAAA TCGTCAGTAC CATCGGCGTG CACAATCCGG GCTTCGGCTG GGCGGAAAGT
CTGTTCGGTC TGCATATGGG CAAGGTTGCG CTGATTACCG GCGGCAGCGC GGGGATCGGC
GCGCAGATTG GACGTCTGCT GGCGCTCTCC GGCGCCCACG TGATGCTGGC GGCGCGCAAT
GCTGAACAAC TGGAGCAGAT GCGCGCCCTG ATCGTGCGTG AGGTGCGTGA TGCCAGTTAC
CCCGATGCCG AGTCGCGCGT TGCAATCTTC CCCAACAGCG ATGTTTCTGA CATCGATGGA
TTGGAGCGGC TGGTCAACCA TACGCTGCGG GTGTTCGGCA AGGTCGATTA TCTGATCAAC
AATGCGGGCA TTGCCGGCGC CGAAGAAATG GTGATCGATA TGCCGGTTGA TGCCTGGCGC
CATACGCTGC GCGCCAACCT GATCAGCAAC TATGCGCTGC TGCGTCGGCT CGCGCCGCAA
ATGAAAGCGG CAGGCGGCGC GTATGTCCTG AACGTCTCAT CGTACTTCGG CGGCGAAAAG
TATGTGGCGA TCCCCTACCC CAACCGCGCC GATTATGCGG TCAGCAAAGC GGGTCAACGC
GCAATGGTCG AAAGCCTGGC GCGCTTCCTG GGACCGGAGA TTCAGATCAA TGCCATCGCT
CCCGGACCGG TGGAGGGGGA GCGGTTGAAA GGCGCCGCCA ATCGTCCCGG TCTATTTATG
CGTCGCGCCC GCTTGATCCT CGAAAATAAG CGTCTCAATG AGGTTTTTGC CGCTCTCCTG
GCGGCGCGCC ACGAAGGCGC CGTGATCGCT GCGCTGCTGC CGGATCTGTT TGTGAATGAT
CTCCAGACGA TCGCCGACAA CCCGGCCATG CCTGCGCCGG TGCGCCGCCT GGCAACCATG
CTGCGCGAGA CGACCGACGC TGGCGGGAGC GCTCAATCGT ACCTGATGAA TGCCACCATT
GCGCGAAAAC TGCTCAATCG CCTGGAGAAT GGCGGATACA TCACCGCTGG CGACCGGCGT
GCGTTGACCA ATGAGCCGCC CGATCCGTTC TTCACCGAGG CGCAGATCGA GCGCGAGGCG
ATCAAGGTGC GTGATGGCAT CCTTGGCATG CTGCATCTGC AACGCATGCC GACCGAGTTT
GACGTGGCGC TGGCGACCGT ATTCTACCTG GCTGACCGTA ATGTGACCGG TGAAACGTTC
CATCCATCGG GTGGTTTGCG CTTCGAGCGC ACTGTGACCG AAGGTGAACT GTTCGGTAAA
CCAGGGCGGC AGCGGCTCGA GCGCATGGCG GGAAGCGTTG TCTACCTCAT TGGCGAGCAT
CTGCGACAGC ATCTGCTGCT GCTTGCACGC ACGTTCCTTG ATGAAATCCA CGTTGCGCGC
GTTGTGCTGC TGACGGAGAC AGAGCAGGCG GCTGCCGAAC TGGCGACTGT TTTTGCCGAT
GAAGAAGCTG CCGGGCGTTT CGTCATCATT CCGACCGGCG GCGACATTGA GGGAGGCATT
GATCGCGCGA TGGCGGAGTA TGGTCGCCCC GGACCGGTCA TCTCGACGCC GTTCCGTCCA
TTGCCGTCAC GGGCGCTCAG CGCCCAGAAC GGCGACTGGA GCAATGTTCT GACGACGCCT
GAGTTCGAGG AACTGGTCGA ACAGCACATC ACCCATCACT TCCGGGTTGT GCGCAAAGCG
GGGTTGATCG AGGGCGCCAA TGTCACCCTT GTCACACCGC CAACCTCGGC GCGATCCACT
GCGGAAGAGT TCGCACTGGC AAACTTTATC AAAACGACGC TGCACGCCCT CACCGCAACC
GCCGGTGCAG AAAGTGAGCG CACGATGCCG CACGTGCCGG TCAATCAGGT GGACCTGACC
CGACGCGCGC GCAGTGAAGA GCCACGCACA CCGGCAGAGG AGGAAGAAGA GTTGCAACGC
TTCGTCAATG CCGTGCTGCT CACCAGCGCA CCTCTTCCAA CGCCGCTCGA AAGTCGCTAC
CGGGCGCGCA TCTACCGCGG GAATGCAATA ACCGTATAA
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| Protein sequence | MSTTRRHDRL EGKVALITGG AGNIGEVITR RFLAEGATVV ITGRNVEKLA AYRRRLIDEE
RIAPDRVVAL RMDGSDMAQV RAAIAQIVHG GADVPTPLKR IDILVNNAGS AGPRRRLVDI
PLEPSEVHPP DTETLAQAVG NLVGVAWNLT RAAAPYMPPG SSIINVSTIF SRTDYYGRIA
YVVPKAALNA LSQGLARELG VRGIRVNTIY PGPIESERIH TVFQAMDALK GQPEGETARS
FLRLMRLSRA DTQGEVTKRF PLPVDVANTA VFLASEESAA FTGHAFEVTH GMEAPVESRT
TFVSRPGLRS VDATGNVILI CAGDQVDDAI ALSDTLRSCR ATVVVGFRDV QALEKASALL
REPRHVAPAD MYGRPTMVAE TRLVHLDPLD SRAAAQTLER IRAELGTLHH AVILPASLRH
APTESLIDVD DRIIDRFLEQ ELVGAIALAR ELARFWEEHP AGSRAHRVLF VSNPDDQQGN
RYADILRAAV EQLARVWRHE SEYDAANPAH RHEDQPGAAV WANQLIRYVN SESANLDFTC
AWVAKLLGSD RRIAEINLYL PEQIVSTIGV HNPGFGWAES LFGLHMGKVA LITGGSAGIG
AQIGRLLALS GAHVMLAARN AEQLEQMRAL IVREVRDASY PDAESRVAIF PNSDVSDIDG
LERLVNHTLR VFGKVDYLIN NAGIAGAEEM VIDMPVDAWR HTLRANLISN YALLRRLAPQ
MKAAGGAYVL NVSSYFGGEK YVAIPYPNRA DYAVSKAGQR AMVESLARFL GPEIQINAIA
PGPVEGERLK GAANRPGLFM RRARLILENK RLNEVFAALL AARHEGAVIA ALLPDLFVND
LQTIADNPAM PAPVRRLATM LRETTDAGGS AQSYLMNATI ARKLLNRLEN GGYITAGDRR
ALTNEPPDPF FTEAQIEREA IKVRDGILGM LHLQRMPTEF DVALATVFYL ADRNVTGETF
HPSGGLRFER TVTEGELFGK PGRQRLERMA GSVVYLIGEH LRQHLLLLAR TFLDEIHVAR
VVLLTETEQA AAELATVFAD EEAAGRFVII PTGGDIEGGI DRAMAEYGRP GPVISTPFRP
LPSRALSAQN GDWSNVLTTP EFEELVEQHI THHFRVVRKA GLIEGANVTL VTPPTSARST
AEEFALANFI KTTLHALTAT AGAESERTMP HVPVNQVDLT RRARSEEPRT PAEEEEELQR
FVNAVLLTSA PLPTPLESRY RARIYRGNAI TV
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