| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3189 |
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| Symbol | |
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| ID | 5210160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 4013187 |
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| End bp | 4014143 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596781 |
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| Product | HhH-GPD family protein |
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| Protein accession | YP_001277500 |
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| Protein GI | 148657295 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAC GTAAGAGTAT CATCCAAAAG AACGAAAGTT TACCGGCGTT TACCAGGTTC
CATCAGGCGC TGATGAACTG GTTCAGTGAG GCGGCACGCG ACCTCCCCTG GCGCCGCACC
CGCGATCCAT ACCGCATTAT GGTTGCAGAG GTGATGCTCC AGCAAACACA GGTTGATCGC
GTGTTGCCGA AGTACGAAGC GTTCCTTACA TGCTTCCCGA CGCTTCAGGC GCTGGCAGAC
GCACCGACCG CAGAGGTCAT CCGTCTGTGG TCGGGGCTTG GCTACAATCG CCGGGCGGTC
AATCTGCAAC GCGCAGCACG TGAAATCGTC GAACGCTTCG ACGGCGTTTT TCCGCGCGAT
GTCGCTGTGC TGCTGACGCT TCCGGGCATC GGACCCTACA CCGCTGGTGC TATCGCCTGT
TTTGCCTTCG AGCAGGATGT GGCATTCATG GACACCAACA TCCGGCGCGT TATTCGCCGC
GCATTGACCG ATCCTGCGGC AACGGTCAAC GAACGAGATT TGCTGGCGCT GGCGCAGGCA
GCGCTCCCAA CCGGGCGCAG CTGGATGTGG AACCAGGCGT TGATGGAACT GGGGTCGCTG
ATCTGCACTG CCGACTCGCC AGCATGCTGG CGCTGTCCAC TGCGCGATCT GTGCTGCGAC
TATGCCGCGC GCCGCACGTC GGACGGGCAT CTTGAAGCGA CGCCGGTGCG CAAACGCATT
GCTGAACATC GTGAACGCCC GTTCGTCGGA TCGAATCGCT ACTTCCGCGG ACGTGCTGTT
GCCGCGCTCC GCGCATTACC CCCCGGCACA ACCCTTGACC TGGCAGAACT TGGACCACAA
GTGCGCCCCG ATTATACCCC GGAAGATGAA GCCTGGCTGG TGACCCTCCT CAACGGATTG
GAGCGCGATG GATTAGTCGT GTGGCATGGC AATGGGGTAC GACTTCCGGA GGAATGA
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| Protein sequence | MTIRKSIIQK NESLPAFTRF HQALMNWFSE AARDLPWRRT RDPYRIMVAE VMLQQTQVDR
VLPKYEAFLT CFPTLQALAD APTAEVIRLW SGLGYNRRAV NLQRAAREIV ERFDGVFPRD
VAVLLTLPGI GPYTAGAIAC FAFEQDVAFM DTNIRRVIRR ALTDPAATVN ERDLLALAQA
ALPTGRSWMW NQALMELGSL ICTADSPACW RCPLRDLCCD YAARRTSDGH LEATPVRKRI
AEHRERPFVG SNRYFRGRAV AALRALPPGT TLDLAELGPQ VRPDYTPEDE AWLVTLLNGL
ERDGLVVWHG NGVRLPEE
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