Gene RoseRS_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3172 
Symbol 
ID5210143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3994930 
End bp3995478 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID640596764 
Productacetyl-CoA carboxylase, biotin carboxyl carrier protein 
Protein accessionYP_001277483 
Protein GI148657278 
COG category[I] Lipid transport and metabolism 
COG ID[COG0511] Biotin carboxyl carrier protein 
TIGRFAM ID[TIGR00531] acetyl-CoA carboxylase, biotin carboxyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GTGAGCGCGA TCACACTGTG CAGTCGATCG AGGACGAGTT CGGCTTGAGC 
GCCGTGCGCG AACTACTGCG CATGATCAGC GACACGGATG TGAATGAGAT CTCGATTGAG
CGCGGCACGA CACGCCTGCA TATCAAGCGA GGTCCGTCGC TGCATCCCCA TACGCCGGCG
CCGATGTTCG TCACACCATC GATTGCCGCA AACGTGCAAT CTTCGGCGCC GCCGATCGGT
ATCGTTCAGG CGCCGGTGCA GACGCCGCCG CCGGTAACAC CCGCTCCGGA GCCGGACGCC
CTCCCGCCGG GCAAGATCAT CGCTGCGCCA ATGGTCGGAA CATTCTATGC CGCGCCGTCG
CCGAAGGATC CGCCCTACGT GCAGGAAGGC GACATCATTA ATGTCGGTGA TCGGGTCGGC
ATTATCGAGG CGATGAAGAT GATGAACGAG ATCGAGAGCG AGTTTGCCGG TCGGGTCGTG
CGTATTCTGG TGCAGAATGC GCAACCGGTG GAGTATGGGC AGCCATTGAT GGTTATCGAG
CCGCTGTAA
 
Protein sequence
MSEGERDHTV QSIEDEFGLS AVRELLRMIS DTDVNEISIE RGTTRLHIKR GPSLHPHTPA 
PMFVTPSIAA NVQSSAPPIG IVQAPVQTPP PVTPAPEPDA LPPGKIIAAP MVGTFYAAPS
PKDPPYVQEG DIINVGDRVG IIEAMKMMNE IESEFAGRVV RILVQNAQPV EYGQPLMVIE
PL