Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3153 |
Symbol | |
ID | 5210123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3967393 |
End bp | 3968361 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596744 |
Product | Allergen V5/Tpx-1 family protein |
Protein accession | YP_001277464 |
Protein GI | 148657259 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAATCC GATGTCTCCG CATTATAAGC TTTCTGATTT GCCTCAGTCT TATTCTCTTT GTTCTCAACG CTCCGCCATT GACACAATCA CTTCTTGCGC AAACTGACCC GATACAACGG GTTATTGAGC TGACAAACGA GGTACGGATG GCTAATGGCC TGTCGCCGCT GAAACGCAAC GACATCCTGC AGCAGGCAGC GGTCTACATC GTGGAGGACA ACGCCAGCCG GAATACCCTG TCGCACACCG ACGGTCTTGG GCGCGATATG GGGCGGCGCT TTCAGGATTT TGGCTATGCC TATTCCATAG CCGCTGAGAA CCTGGCAGGC GGTTATGCCT CTCCTGAGAC CGCTATCGAG GGTTGGATGA ATAGCTCCGG TCATCGAGCG AATATCCTAC GGACTGGCTT GTGCGAAATT GGCGTTGGTT ACACCTACCG GAGCGGCACG ACCTACGGCC ATTTCTGGTC GCAGACCTTC GGCTGCCGCT GGAATACCTA CCCGGTGGTG ATCAACGGCG AGGCGGCCGT CACGACTTCG CCGACGGTGA ACCTGTACAT TTATGGTGCG GGGTGGGCAG AGCAGATGCG GCTGAGCAAT GATAGAGTCA ACTGGACGGA ATGGCAACCA TATGCCACCA ATTCCACCTG GACGCTGGCG ACAGGAAACG GGGAGCGCAC CGTTTTCGTG CAAATTCGGC GCGGGACGAC CATCCACGAG GCAAGCGATA CGATCGTGGT GCAGCAAACA AACAACAATA CCGCCACCCC AACCCCATCG GTCACCCCCT CCTCGACCCC GACGCGTACA CCGACCCTGA CCCCATCGGT CACGCCCTCT CTGACCCCAT CACGCACCCC CTCCCCGACC CCGACGCGCA CACCCTCCTT ATCGCCGTCG GTCACACCCA CCATACCGCT GATGCTGCCG TCACCGCGGC AGGTGTACCT GCCGCTGGTG GTGCGGTGA
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Protein sequence | MSIRCLRIIS FLICLSLILF VLNAPPLTQS LLAQTDPIQR VIELTNEVRM ANGLSPLKRN DILQQAAVYI VEDNASRNTL SHTDGLGRDM GRRFQDFGYA YSIAAENLAG GYASPETAIE GWMNSSGHRA NILRTGLCEI GVGYTYRSGT TYGHFWSQTF GCRWNTYPVV INGEAAVTTS PTVNLYIYGA GWAEQMRLSN DRVNWTEWQP YATNSTWTLA TGNGERTVFV QIRRGTTIHE ASDTIVVQQT NNNTATPTPS VTPSSTPTRT PTLTPSVTPS LTPSRTPSPT PTRTPSLSPS VTPTIPLMLP SPRQVYLPLV VR
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