Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3144 |
Symbol | |
ID | 5210114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3954950 |
End bp | 3955765 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596735 |
Product | hypothetical protein |
Protein accession | YP_001277455 |
Protein GI | 148657250 |
COG category | [S] Function unknown |
COG ID | [COG0398] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.552992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACACC AATCATCTGC GCCACTCCAT CGTCGGGATG GCTCTCTGGC GCATCACCGG CAAACGATCA TCGCCAGCGC AATCTGGCTG GCGCTGGCGG GTGCATTTCT CGGCTACAGC CTGTCCAGCG GCGCATCCCC GACAGAGACG TTGCAGGCGG CGATCGATCT GCTGCGCACG CCGTTCGGAC CGCTGATCTA CATCCTGATC TATACCCTGC GTCCGCTGGC GTTCTTCTCC GCAGTGATCG TGACGCTGAT CGGAGGTGCG ATCTGGGGTC CGTTCTGGGG AACACTGTTT GCGATCATCG GCTCGAACAT GTCGGCGACG CTGGCATACT GGTTTGGGCG GGCGTTTGGT TCTGGAGTCT TGCCCGAAGG GAAGGCAGGC GCGCTTGAGG GGATGGTTGG GCGCTACACC AGACGATTGC AGGCGAACGC CTTCAGCGCG ATCCTGATGA TGCGTCTGAT CTATCTGCCT TACGATCTGG TGAACTATCT GGCAGGTTTT TTACGCATCC CCTACCGCCC GTATCTCCTG GGATCGGTCA TCGGCGCACT GCCGGGCACG CTGACCTTTA CGCTTGCTGG CGCTTCGCTC GCCCTGGACG ATATTCTCGC CGGACGTTTC AGCATTTCGG TGGTGAACCC GTGGACGCTG GCATGCTCCG CCGGGTTGTT CGTTGCTGGC ATTGTGATCG CGCGGATGCT GCGCCGCAAA GAACAGCAAT TAACGACTCT GGTCGTGTCT GCCGACTCTC CACATGCGTC ACCACCAACA GAGGATTCGT CGGGCACACT GGAACGCATA CCCTGA
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Protein sequence | MPHQSSAPLH RRDGSLAHHR QTIIASAIWL ALAGAFLGYS LSSGASPTET LQAAIDLLRT PFGPLIYILI YTLRPLAFFS AVIVTLIGGA IWGPFWGTLF AIIGSNMSAT LAYWFGRAFG SGVLPEGKAG ALEGMVGRYT RRLQANAFSA ILMMRLIYLP YDLVNYLAGF LRIPYRPYLL GSVIGALPGT LTFTLAGASL ALDDILAGRF SISVVNPWTL ACSAGLFVAG IVIARMLRRK EQQLTTLVVS ADSPHASPPT EDSSGTLERI P
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