Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3131 |
Symbol | |
ID | 5210101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3931908 |
End bp | 3933107 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596723 |
Product | NB-ARC domain-containing protein |
Protein accession | YP_001277443 |
Protein GI | 148657238 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00106243 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAGTG ATCAGCCACA GCAGAACCAG GATATCAGCG GCGCAGGCGC TGCTGGCGTG GTCGGTGACG CGACGAATAG CCCAATCACC ACCGGCAACA ACAACACCAT TATTCAGTCT GGCCGCGATA CTGTACTGTA TACCAATCTC CCGCCACCCC CTGCGCCTGG CAGCGTCCCA CTGAAGCCTG CCCTCATCAT CGGGCGCGAC AATGATCTCC AGGCGCTGAA GCAACGGGTT GGCATCTCGG CCAAAGGCGA AAGTCCTGCC CCGTTGAAGG TGCTGACCGC AATACGCGGC TGGCCGGGTG TCGGCAAGAC CACCCTGGCG GCTGCGCTCG CACACGATCC GGATATCAAC GCGCGTTTCC CTGATGGAGT GCTGTGGGCC TCGCTTGGCC AACAGCCAGG ACTCTTCGGT GAACTGGCCG CCTGGGGACG TGCCCTTGGT GTGCCGGATC TTAACCAGGC GCATACCGTT GAAGAAGCAT CTAACCTGCT GCGCGGCCTG CTGCGCAACA AGCGCTACCT TCTGATTGTC GATGACGCCT GGCAGGCTGA GCACGTGGTA CCCTTCAATG TCGGCGGCAG TGGTTGCGCG TTGCTCATCA CCACGCGCCT GCCAGAAGTG GCCCGCGCAA TCGCCCCAAC GCCCGATGAT GTCTATGTGC TCGGTGTGTT GAGCGAGACC GATGCGCTGG CGCTGCTGCG CACCTTAGCG CCGACGGTAG TTGCAGAGAA CGAGGCGACC AGCCGCGAAC TGGTCAAGGA TCTGGAAGGT CTGCCGCTGG CTATTCAGGT GGCCGGTCGG CTGCTCCACA CTGAAGCAAG CTATGGCTTT GGCGTCGAGC AATTATTGGT CGATATCCGC GAGGGCGCAA GGCTGATCCA GGCTCAGGCG CCAGCTGATC GCGCCGAAGT TGCCAGAGAG ACAACGCCCA CCGTTGCGGC GCTCCTGAAA AAGAGCACCG ATCTGCTGGA TGCCCACACG CTCGACTGCT TCGCCTACCT TGGCGCCTTC GCGCCGAAAC CGGCCACCTT TGACGCTGCG GCGATGCAAG CCGTGTGGGA GGTTGACGAC CCAAGGCCGA TCATCCGCAC CCTGGTTGAC CGCGGCCTGC TAGAGCCCTC AGGCCAGGGC CGCTTCTGGA TGCACGCGGT ACTCGTATCT CATGCAAAGT CGTTCTTGAC AGAGGAGTGA
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Protein sequence | MDSDQPQQNQ DISGAGAAGV VGDATNSPIT TGNNNTIIQS GRDTVLYTNL PPPPAPGSVP LKPALIIGRD NDLQALKQRV GISAKGESPA PLKVLTAIRG WPGVGKTTLA AALAHDPDIN ARFPDGVLWA SLGQQPGLFG ELAAWGRALG VPDLNQAHTV EEASNLLRGL LRNKRYLLIV DDAWQAEHVV PFNVGGSGCA LLITTRLPEV ARAIAPTPDD VYVLGVLSET DALALLRTLA PTVVAENEAT SRELVKDLEG LPLAIQVAGR LLHTEASYGF GVEQLLVDIR EGARLIQAQA PADRAEVARE TTPTVAALLK KSTDLLDAHT LDCFAYLGAF APKPATFDAA AMQAVWEVDD PRPIIRTLVD RGLLEPSGQG RFWMHAVLVS HAKSFLTEE
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