Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3121 |
Symbol | |
ID | 5210090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3921081 |
End bp | 3922232 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640596713 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001277434 |
Protein GI | 148657229 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000483528 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000199281 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGCATCTCG CCATCAACGC CATGTTCTGG TCGCAACCGA CCGTCGGCAG CGGGCAGTAT CTGCGCATGC TCGTCCATGC CATGCTATCC GTCGCGCCCG ATGTGCGGGT GACTCTGCTC CTGCCTGCCG GTCGCCCGGT CGCTGAACCG CTGCCACCGA ATGTCCAGGC GGCGCCTGTG CCCACGCCGT TCGATGGGCG CAACGCGAAC CTGGCGAAGG TCTGGTTCGA GCAGATCGCC GTTCCACGCG CAGCGCTGCG CCTGAATGCC GACCTGCTGC ATGTACCGTA CTTTGCGCCG CCGCTGCGCC CGCCGCTGCC GACCGTCGTG ACGATCCTGG ACATTATTCC GCTCTTGCTG CCGGAGTATC GGGGACGGGC AGCGGTGCGT CTCTATATGC GCCTGGTCGC GCGCGCCGCG CGGCATGCGA CGCAGATTAT CACGATTTCG CACCATAGCG CCAGCGATAT TATCCGTCAC CTCGGCTGTC AGGCAGCGCG CGTGGCGGTC GTCCACCTGG CGGCCGGCGC ACAGTTCCGC CCGCGCGACC GTACCTTGAG CGAAACGGAA GTTGCCGCCC GCTACAGCGT CACGCCCCCG TTCGTGTACT ATGTCGGCGG GCTGGACGCG CGGAAGAACC TGGCGACGCT GGTGTGGGCA TTTGCGCGTA TGCGATACGC TGGCGGACCT CCCGCCACGC TGGTGATTGC CGGACGTGCG GCTGGCAACG ATCCACGGAT GTTTCCCGAC CTGGATGCTA TCATCATGTT CGCCAGAGCC GGCGCTTTTG TGAAGCGCAT TGATGTCCCC TACGAAGATG CGCCGCTGCT CTATGGCGCA GCAACGGTAT TCGCCTTTCC GTCGCGCTAC GAAGGGTTTG GCTTACCGCC GCTCGAAGCC ATGGCGTGCG GTACGCCGGT GATCGTCGCC GATGCCGCCA GCCTGCCCGA GGTTGTCGGC GATGCGGCGC TGCGTGTTCC AGCGGAGGAC GTGACAGGAT GGAGCGCTGC ACTCTGGCGC ATGCTGGCGG ACGACGCCCT GCGCGCCGAT CTGTCCCGAC GCGGACTGGA GCGCGCGGCG CAGTTCAGCC CGGATCGTAT GGCGCGCGAG ACGCTGGCAA TCTACGCAGC GACACGCAAC AGTTCCGGTT GA
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Protein sequence | MHLAINAMFW SQPTVGSGQY LRMLVHAMLS VAPDVRVTLL LPAGRPVAEP LPPNVQAAPV PTPFDGRNAN LAKVWFEQIA VPRAALRLNA DLLHVPYFAP PLRPPLPTVV TILDIIPLLL PEYRGRAAVR LYMRLVARAA RHATQIITIS HHSASDIIRH LGCQAARVAV VHLAAGAQFR PRDRTLSETE VAARYSVTPP FVYYVGGLDA RKNLATLVWA FARMRYAGGP PATLVIAGRA AGNDPRMFPD LDAIIMFARA GAFVKRIDVP YEDAPLLYGA ATVFAFPSRY EGFGLPPLEA MACGTPVIVA DAASLPEVVG DAALRVPAED VTGWSAALWR MLADDALRAD LSRRGLERAA QFSPDRMARE TLAIYAATRN SSG
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