| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3119 |
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| Symbol | |
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| ID | 5210088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3918777 |
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| End bp | 3919685 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596711 |
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| Product | peptidase C60, sortase A and B |
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| Protein accession | YP_001277432 |
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| Protein GI | 148657227 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000120301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000160759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCGATGA AGCACACCAT CCGCGAAGCC GTCACCAGCG CACACAACCC GCCAAAGGTC
GGGCGTATTT TGCTCAACCC TTTTCGACGT GCGAAGCGTC GTGCTGGCGC TCCAACAACA
TTTCGCGAAA AACTCTACTG GACGCTTGGC AACCTGCTTA TGCTGATCGG CGCCATCCTG
CTGGCGTATG TTGGCGGCAT CTACGCCCAG GCGGATTACA ACCGCTACGC AGCGCGCGGC
GACACCGACG CCCCGCCGCC TGCACCGGTC GCCGCACCGC GCGCCCCCGA CGCCGAGCCG
ACGCCATTTG TCGCGCCGCT GCCGTTCGTC GCGCCGCGCC TCAACACCGC CGAAGGGCAA
CTCATCAGCG ACGTGCCGGA CATCGTCAGG TCTATCGTTC CATCCCAGAT TTCGCGCATC
ATCATTCCGA GCATCGACGT CGACTCAAAA GTCGTCGAAG TCGGCTGGGA AGTCGCAGAA
CAGAACGGGC GACAGGTCGC CGTCTGGCAG GTCGCCGAGT ATGCTGTCGG GCACCATCGC
GGCTCCGCCA ACCCCGGCGA AGGGAGCAAC ATCGTGCTTG CCGGTCATGT TGGCGGCTAC
GGCAAAGTCT TCAAAGATCT GATCAACGTC AAAGAGGGTG ACCAGATCAT CCTGTTCGCT
GGCGGTCAAC AGTATCTCTA CGTCGTGCGT GAACAGGTAA TGGTGCACGA GGAAGGCGTA
TCACCCGAAC AGCAGGCGAT GAACGCCCTC TACATCGCGC CGACCAGCGA AGAGATGGTC
ACGCTGATCA CCTGCTGGCC CGACCGCGGA CCGGAAAAAT TCAAGTATCG CATCATCGTG
CGCGCAACCC CGTATGGCGC AGGAAACGAT GAGTCGCTCA CCAATACCGA AGGCTGGAAT
GTGCGCTGA
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| Protein sequence | MPMKHTIREA VTSAHNPPKV GRILLNPFRR AKRRAGAPTT FREKLYWTLG NLLMLIGAIL
LAYVGGIYAQ ADYNRYAARG DTDAPPPAPV AAPRAPDAEP TPFVAPLPFV APRLNTAEGQ
LISDVPDIVR SIVPSQISRI IIPSIDVDSK VVEVGWEVAE QNGRQVAVWQ VAEYAVGHHR
GSANPGEGSN IVLAGHVGGY GKVFKDLINV KEGDQIILFA GGQQYLYVVR EQVMVHEEGV
SPEQQAMNAL YIAPTSEEMV TLITCWPDRG PEKFKYRIIV RATPYGAGND ESLTNTEGWN
VR
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