| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3113 |
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| Symbol | |
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| ID | 5210081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3910455 |
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| End bp | 3911702 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640596704 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_001277426 |
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| Protein GI | 148657221 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000139968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00618461 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCCCC TCGATCTGAC CTGGATTCGC GCACAGTTTC CTGCGCTGGC GCAAGAAGTG
AATGGACATC CCGCCGTGTT TTTTGATGGT CCAGGCGGAA CGCAGGTTCC GCAGCGGGTG
ATCGATGCTG TCGCCGATTA TCTGATCCAC CACAATGCCA ATACTCATGG CGCATTTGCA
ACCAGTCGCC GCACTGATGA AACGATTGAC GCGGCGCGCG CCGCTATGGC TGATTTTCTG
GGGTGTGCTG CGGACGAGGT GGTTTTCGGA CCAAACATGA CCACGCTGAC CTTTGCGATC
AGCCGCGCAT TTGGGCGTGA CATTCGCCCC GGTGATGAGA TTGTCCTGAC GCGCCTGGAT
CATGATGCCA ACGTCGCACC CTGGAAAGCG CTCGAAGAAC AGGGCGCCGT CATTCAGATG
GTCGATATCG ACACCGAAGA ATGCACCCTC GATATGGCGG ATATGGCGCG CGCCATCGGT
CCACGCACGA AACTCGTCGC GGTCGGGTAT GCGTCGAACG CCGTGGGAAC GATCAACGAC
GTGGCGACCA TCACACGGAT GGCGCACGCG GTCGGTGCAC TGGTGTATAT CGATGCAGTG
CACTACGCCC CGCACGGACC AATCGATGTG CGGGCGCTCG ATTGCGATTT TCTCGCGTGC
TCGCCGTACA AATTCTTTGC ACCGCATATG GGAGTTTTAT ACGGCAAACG TGAGCACCTG
GCGCGCCTGC GTCCGTATAA GGTTCGACCC GCCTCTGACG ATGTTCCTGA TCGCTGGGAA
ACTGGAACCA AAAACCACGA AGGGTTAGCC GGGGTAACGG CGGCAATCGA GTACCTGGCA
GAACTTGGGC AGCGCATCAA GCCAGCGACG ACCCGACGCG CGGCGCTGGT GCAGGCGATG
GAAGCGATCA AAGCGTATGA ACGCGGATTA TCGGAGCAAC TGATCGCCGG TCTCCTTGCA
ATTCCGGGAT TGACCTTCTA CGGTATCAGC GACCCGGCGC GTTTCGACAT GCGCACGCCG
ACCGTGGCAG TGCGTCTTGC CGGACGCACA CCGCGCGAAC TTGCCGAAGC GCTGGGACGG
CGCGGCATCT TCTGCTGGGA CGGCAACTAC TACGCGATCA ATCTGACCGA GCGCCTGGGC
GTTGAAGCTG ATGGCGGCAT GCTGCGTATT GGTCTGGTGC ACTACAACAC CGTGGAAGAG
ATCGAACTAT TGCTGGAAGC GCTGAACGAA CTGAGGATCG GGAACTGA
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| Protein sequence | MHPLDLTWIR AQFPALAQEV NGHPAVFFDG PGGTQVPQRV IDAVADYLIH HNANTHGAFA
TSRRTDETID AARAAMADFL GCAADEVVFG PNMTTLTFAI SRAFGRDIRP GDEIVLTRLD
HDANVAPWKA LEEQGAVIQM VDIDTEECTL DMADMARAIG PRTKLVAVGY ASNAVGTIND
VATITRMAHA VGALVYIDAV HYAPHGPIDV RALDCDFLAC SPYKFFAPHM GVLYGKREHL
ARLRPYKVRP ASDDVPDRWE TGTKNHEGLA GVTAAIEYLA ELGQRIKPAT TRRAALVQAM
EAIKAYERGL SEQLIAGLLA IPGLTFYGIS DPARFDMRTP TVAVRLAGRT PRELAEALGR
RGIFCWDGNY YAINLTERLG VEADGGMLRI GLVHYNTVEE IELLLEALNE LRIGN
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