Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3111 |
Symbol | |
ID | 5210079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3906395 |
End bp | 3907906 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596702 |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_001277424 |
Protein GI | 148657219 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.124455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCCT TTCCCCGTCG GAGCGGATTG ATTCTGCACC CCACATCTCT CCCCGGACCA TACGGCATCG GGGATGTCGG GGTCGAAGCG TACCGTTTTG TGGACTTTCT CGTCGCTGCC GGGCAGACCT GGTGGCAGAC GCTGCCGCTC AACCCGACCG GGTTCGCCGA CTCGCCGTAC CAGGGGTTAT CCGCCTTTGC TGGCAACCCC ATGCTGATCA GTCCCGACCG TCTGCTCGCC GCCGGGCATC TGATGGTTGA TGATCTGGCA GACCGTCCTG TCTGTTCCGA TGAACGGGTT GATTTCGGCG TCGTTATTGC CTGGAAGTCG GCGCTGCTCG ACCGGGCCTT CGAGCGTTTT CGGGCGTTCT CTGCCGCTGA TCGCGCACCC TTTGCGCAGT TCTGTCAGGC GCAGGCTGCC TGGCTCAACG ATGTTGCGCT GTTCATGGCG CTTAAACAGG AGTATGGCAT GCGTACCTGG ACGGAATGGC CCGCCCCGCT CGCTGCGCGC GATCCGGATG CGCTGGCGCA GGCGCGCAAC GAACTTGCGG ACGCCATCGA GGCGCAGAAG TATCGTCAGT GGGTTTTCTT CACGCAGTGG AACGATCTGC GTCGCTATGC CAATCGGCGG GGCGTCCGGA TTATTGGCGA TATGCCGATC TTCGTTGCCC TCGATAGCGC CGATGTGTGG GCGCATCCCC ACCTGTTCCA TCTCGATGAC GATCTGCGCC CAACCTGTGT GTCGGGAGTG CCGCCCGATT ATTTCAGCGA AACCGGGCAA CTGTGGGGAC ATCCGCTCTA CCGCTGGGAC GTGATGGCTG CCGATGGATA CCGCTGGTGG ATCGATCGTT TTCGTGCTGC ATTTGCGGTT GCTGATGTGG TACGTATCGA CCATTTCCGC GGGTTCTACA ACTATTGGGA AATCCCGGCA GGTGCGTCAA CCGCGATTGA TGGGCGGTGG GTCGATGGTC CGCGCGATGC CCTGTTTACA GCGGTTACAT CTGCACTGGG AGACGTGGCG ATCATCGCAG AAGACCTGGG CGATTTCACG CCCGAATCAC GCGCCGGTCT CGATACGCTG ATGGCGCAGT TCGGCTTTCC GGGCATGCGC ATCCTTCAGT TCGCCTTCAA CCGCCGCGAA GGTGATCGTT TCTTCCCGCA CAACTATCCG CGTGCGTGCG TCGTTTACAC CGGCACCCAC GACAACGACA CCCTTGTCGG ATGGTTCACC AGCAGTTCAA CCGATGCCGA ACGTCGTGAT GCGCTCCGTT ATTTGTGCGG CACTGCCGAT GATATTTCCT GGGCATTCAT TCGCACGGCA TGGATGTCGG TCGCAGATAC GGCGCTGACA ACCGTGCAGG ATCTGCTCGG TCTGGGAAGC GAGGCGCGGA TGAACCTGCC CGGCACACTG GGGATGCACA ACTGGACCTG GCGCACGTCG GCTGGCGCCC TTGATCAACA GATCGCCAGG CGTCTGCGCG ATCTGACAGA GATCTATCAG CGATTACCCT GA
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Protein sequence | MPPFPRRSGL ILHPTSLPGP YGIGDVGVEA YRFVDFLVAA GQTWWQTLPL NPTGFADSPY QGLSAFAGNP MLISPDRLLA AGHLMVDDLA DRPVCSDERV DFGVVIAWKS ALLDRAFERF RAFSAADRAP FAQFCQAQAA WLNDVALFMA LKQEYGMRTW TEWPAPLAAR DPDALAQARN ELADAIEAQK YRQWVFFTQW NDLRRYANRR GVRIIGDMPI FVALDSADVW AHPHLFHLDD DLRPTCVSGV PPDYFSETGQ LWGHPLYRWD VMAADGYRWW IDRFRAAFAV ADVVRIDHFR GFYNYWEIPA GASTAIDGRW VDGPRDALFT AVTSALGDVA IIAEDLGDFT PESRAGLDTL MAQFGFPGMR ILQFAFNRRE GDRFFPHNYP RACVVYTGTH DNDTLVGWFT SSSTDAERRD ALRYLCGTAD DISWAFIRTA WMSVADTALT TVQDLLGLGS EARMNLPGTL GMHNWTWRTS AGALDQQIAR RLRDLTEIYQ RLP
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