Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3106 |
Symbol | |
ID | 5210074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3899835 |
End bp | 3900338 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640596697 |
Product | glutathione peroxidase |
Protein accession | YP_001277419 |
Protein GI | 148657214 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.422985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.284005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATCT ACGAGATGAC TGCCAATCTT ATTGACGGCA CACCGAAGTC CCTCGGCGAC TACCGGGGCA AGGTGCTTCT CATTGTGAAC GTTGCGAGCA AATGCGGATT TGCGCCGCAG TATGCCGGTC TTGAAGCGCT CTACCGTCGT TACCAAAATG ATGGTCTGGT TGTGCTGGGG TTCCCGTGCG ACCAGTTTGG CAGGCAGGAG TTCGATGATC CCAACGCGAT TCAGCAGTTC TGTACGCGCA ATTATGGGGT CAGCTTCCCG ATCTTCGAAA AGGTTGACGT CAACGGTCCG CACACGCATC CATTGTTTGC GTATCTGAAG GCGGAGCGCC CTGGATTTCT GGGGACTCAA ACGATCAAGT GGAACTTCAC CAAGTTTCTG GTTGATCGCG AAGGGAAGGT GCGCCGTCGG TACGCTCCTA CCGACACGCC CGAAGCGATC GAGCGTGATA TTGTCGCTCT GCTCCGCCGT TCACATCCGG CTACGGCTCA TTGA
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Protein sequence | MSIYEMTANL IDGTPKSLGD YRGKVLLIVN VASKCGFAPQ YAGLEALYRR YQNDGLVVLG FPCDQFGRQE FDDPNAIQQF CTRNYGVSFP IFEKVDVNGP HTHPLFAYLK AERPGFLGTQ TIKWNFTKFL VDREGKVRRR YAPTDTPEAI ERDIVALLRR SHPATAH
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