Gene RoseRS_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3106 
Symbol 
ID5210074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3899835 
End bp3900338 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content56% 
IMG OID640596697 
Productglutathione peroxidase 
Protein accessionYP_001277419 
Protein GI148657214 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0386] Glutathione peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.422985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.284005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCT ACGAGATGAC TGCCAATCTT ATTGACGGCA CACCGAAGTC CCTCGGCGAC 
TACCGGGGCA AGGTGCTTCT CATTGTGAAC GTTGCGAGCA AATGCGGATT TGCGCCGCAG
TATGCCGGTC TTGAAGCGCT CTACCGTCGT TACCAAAATG ATGGTCTGGT TGTGCTGGGG
TTCCCGTGCG ACCAGTTTGG CAGGCAGGAG TTCGATGATC CCAACGCGAT TCAGCAGTTC
TGTACGCGCA ATTATGGGGT CAGCTTCCCG ATCTTCGAAA AGGTTGACGT CAACGGTCCG
CACACGCATC CATTGTTTGC GTATCTGAAG GCGGAGCGCC CTGGATTTCT GGGGACTCAA
ACGATCAAGT GGAACTTCAC CAAGTTTCTG GTTGATCGCG AAGGGAAGGT GCGCCGTCGG
TACGCTCCTA CCGACACGCC CGAAGCGATC GAGCGTGATA TTGTCGCTCT GCTCCGCCGT
TCACATCCGG CTACGGCTCA TTGA
 
Protein sequence
MSIYEMTANL IDGTPKSLGD YRGKVLLIVN VASKCGFAPQ YAGLEALYRR YQNDGLVVLG 
FPCDQFGRQE FDDPNAIQQF CTRNYGVSFP IFEKVDVNGP HTHPLFAYLK AERPGFLGTQ
TIKWNFTKFL VDREGKVRRR YAPTDTPEAI ERDIVALLRR SHPATAH