| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3096 |
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| Symbol | |
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| ID | 5210064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3887463 |
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| End bp | 3888158 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640596687 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001277409 |
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| Protein GI | 148657204 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.654608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCTC TCTATGACAC TATTCATTCG CGCTCGTTTC CGTTTGTCAA CTGGATGCTC
ATCATCGCAA ATGTTGCATT CTTCCTGATC GAAGTTGCGC TCGGAACGGA CGCCGAATGG
CTGGTTGCAA CGTTCGGCGT TGTGCCAGCG CGTCTGCTGG CGAATCCAGG ACCCGACCAG
ATTGCGACCC TCTTCTCATC AATGTTTCTC CATGGGGGAT GGTCGCATCT GCTGAGCAAT
ATGCTGGCGC TCTTCATCTT TGGCGACAAT GTTGAGGATC GGATGGGTGG CGGGCGCTAT
CTCACATTCT ATATCATCTG CGGGTTGATC GCCGCCCTGA CCCACGTCTT TTTCAATCCG
GATTCGCGCA TTCCGACCAT CGGCGCGAGT GGCGCTATCA GCGGAGTGCT CGGCGCATAC
CTGGTTCTCT ACCCTACAGC GCGGGTAATC ACCCTGATCC CGATCTTCTT CCTGCCGTGG
TTTGTGGAAA TTCCCGCAGT TATCTACCTG GGCGTCTGGT TCCTTTCCCA GTTGCTGAAT
GGAACACTGG CGATCATCAT TGGCGCGCAG GGGTTTGGCG GTGTGGCATG GTGGGCGCAT
GCCGGCGGGT TCGTCGCCGG TATTGTGCTT GTCGGGCTGT TCATTCAGCG TCGCTACCAG
CGACGAGTCT ATGCAGACGA GTACTGGCCC TGGTGA
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| Protein sequence | MIPLYDTIHS RSFPFVNWML IIANVAFFLI EVALGTDAEW LVATFGVVPA RLLANPGPDQ
IATLFSSMFL HGGWSHLLSN MLALFIFGDN VEDRMGGGRY LTFYIICGLI AALTHVFFNP
DSRIPTIGAS GAISGVLGAY LVLYPTARVI TLIPIFFLPW FVEIPAVIYL GVWFLSQLLN
GTLAIIIGAQ GFGGVAWWAH AGGFVAGIVL VGLFIQRRYQ RRVYADEYWP W
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