Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3091 |
Symbol | |
ID | 5210059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3883776 |
End bp | 3884612 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596682 |
Product | periplasmic binding protein |
Protein accession | YP_001277404 |
Protein GI | 148657199 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.288835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCTCA TGATCGTTCA TGATGCCCTT GGGCGTCGTC TCGACGTGAA ACATCCGCCG CAGCGCATTG TGTCGCTTGT GCCAAGCCTG ACCGAGTGGT TATTCACGAT TGGTCTGGGT GCGCGCGTGG TTGCCGTGAC CGACTACTGT ATCGAACCGG CGGCGGCGCT TGCTGGCGTG CCACGCATTC GCGGCACGAA GAATCCTGAC CGGGCGCGGA TCGTTGCGCT GCAACCCGAT CTGGTGATCG CCGATCAGGA AGAGAACCGT GCACGTGATG TGCAGGCATT GACCGCAGCC GGAATTCCGG TGTATGTCAC CGCGATCCGC AGTGTTGCCG ATGTACCGGT GCAGTTCGAG CAGCTTGCCG CCGTCCTGGG GGCGAGCGAT CAGGCAGCGC CAGGTCTTGC GGCGTTGCGC CAGGCGCTGA AGGCGACGGA TCGGCGCCCG ACGCGACGGA TTCCGACGCT CACCTTCATC TGGCGCGACC CGTGGATGGC AGTGGGCGCG GAGACTTATG CGGGCGATCT GCTGGAACGG TGCGGCGCGG AGAACCTGGG ACGTCGCCTG CCGGGGCGAT ACCCGCGCGC TCCGCTGGAA ACATTCATGC GCCTGCAGCC GGAGGTGATT CTGCTGCCGG ATGAACCGTA TGCGTTCAGC CAGCGTGATT TTGACGCATT TGAGGTATAT CATGATGTTC CGGCAGTCCG TGATGGGCGT GTCCTGCTGT GCGACGGTAT GGCGCTGACC TGGCCCGGTT TGCGCGCCCT TGCAGCGTTG CGCGACATTG CTGCCCTGAT CGATCCTGAC ACACGCGGTT GCGATGCGCC GGATTGA
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Protein sequence | MTLMIVHDAL GRRLDVKHPP QRIVSLVPSL TEWLFTIGLG ARVVAVTDYC IEPAAALAGV PRIRGTKNPD RARIVALQPD LVIADQEENR ARDVQALTAA GIPVYVTAIR SVADVPVQFE QLAAVLGASD QAAPGLAALR QALKATDRRP TRRIPTLTFI WRDPWMAVGA ETYAGDLLER CGAENLGRRL PGRYPRAPLE TFMRLQPEVI LLPDEPYAFS QRDFDAFEVY HDVPAVRDGR VLLCDGMALT WPGLRALAAL RDIAALIDPD TRGCDAPD
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