Gene RoseRS_3089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3089 
Symbol 
ID5210057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3882073 
End bp3883095 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID640596680 
ProductABC transporter related 
Protein accessionYP_001277402 
Protein GI148657197 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.267363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG CGATTCTTGC AACCGAACAC CTGAGCATTG GCTATGCCCC TCGCCGTGGT 
CCACGACGGA TCGTTGCCAG CAACCTGAAC CTGACCCTCC ACGCGGGTGA AGTCGTCTGC
CTGTTGGGAC CCAACGGCGT GGGAAAGTCA ACCCTGCTGC GCACGCTGGT GGGGATGCAA
CCGCCACTGG ATGGACGGGT ATGGCTCGAT GGCGTCGATC TCTCCACGCT GAGCGCTCGT
GAGATCGCCC GCCGTGTGAG CGTGGTGCTG ACCGAGCGCG TCGAGGTCGG GCAACTGACC
GTCTACGCGC TGGTTGCCCT GGGGCGTCAC CCGCATACCG ACTGGACCGG ACGCCTGACG
CCGCATGATG AGGCGATCGT GCGGCAGGCG CTCGAGGCAG TCAATGCGGT CAACCTGGCG
GGACGACTGG TGCACGAACT GAGCGACGGC GAACGGCAAC GGGTGATGGT GGCGCGCGCC
CTGGCGCAGG AACCGCTGGT CGTGGTGCTC GATGAGCCGA CCGCCTTCCT TGACCTGCCG
CGACGAGTCG AGATCATGCG CCTGCTGCGT CGCCTGGCGC ACGAAACACA GCGGGCGATG
ATCCTTTCGA CCCACGACCT CGACCTGGCG CTGCGCAGCG CTGATCTCCT CTGGCTCATG
GCGCCTGGCG GCGGCGTGCA TGCCGGCGCC CCGGAAGACC TGGTGCTCGG CGGAGCATTT
GAGGCGACCT TCGCCACCGA AGGGATCAGT TTCGACCGCC ATGAGGGGCA CTTCCGCATC
CATCCGCCAA CCCAGCGTCG TATCGCGCTG ATGGGCGATG GGGTGGTGCG CGAGTGGACT
GCCCGCGCCC TCGAACGTGC TGGCTATGCA GCGGTCACCC CTGATGAGCC AGTCGAATTA
CGTATCACAG TCACCGGCGA CGGGTATCAA CCGTGTTGGG AAGTGCGGAG GAACGGCGAC
GCACCGCAGC ACGTTCAGAC GCTGCGCGAT CTGGTCGCGC TGGTGCGTCG CATTGAGGGG
TAG
 
Protein sequence
MSRAILATEH LSIGYAPRRG PRRIVASNLN LTLHAGEVVC LLGPNGVGKS TLLRTLVGMQ 
PPLDGRVWLD GVDLSTLSAR EIARRVSVVL TERVEVGQLT VYALVALGRH PHTDWTGRLT
PHDEAIVRQA LEAVNAVNLA GRLVHELSDG ERQRVMVARA LAQEPLVVVL DEPTAFLDLP
RRVEIMRLLR RLAHETQRAM ILSTHDLDLA LRSADLLWLM APGGGVHAGA PEDLVLGGAF
EATFATEGIS FDRHEGHFRI HPPTQRRIAL MGDGVVREWT ARALERAGYA AVTPDEPVEL
RITVTGDGYQ PCWEVRRNGD APQHVQTLRD LVALVRRIEG