Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3083 |
Symbol | |
ID | 5210051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3876334 |
End bp | 3877725 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596674 |
Product | amidase |
Protein accession | YP_001277396 |
Protein GI | 148657191 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0269706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC TCACCCATCT GACAATCGCC GAAGCCGCCG ATCTGCTGGC GCGGCGTGAG ATCGCCGCAG TCGAATTGAC TGAAGCGCAC CTGCGTCGGA TTGACGCCCA CGACGCCCGC CTTAACAGTT TCATCACCAT CACTTCTGAC CACGCGCTCA CACAGGCGCG CGCTGCCGAT GCTGAGCTGA CTCGCGGCAT CCGGCGCGGT CCGTTACACG GCATCCCGCT TGCGCTGAAA GACCTGTACG ATACTGCTGG CATTCGCACC ACCGCTGGCT CGACATTCTT CGCCGACCGC GTCCCCGACA CCGATGCCCG CGCTGTGACG CTGCTCTACC AGGCAGGCGC AGTGCTCCTC GGTAAACTGA ATATGCACGA GTGGGCGCTG GGAGTGACCA ACATCAATCC GCACTACGGT CCTTCGCGCA ACCCCTGGGA TCCATCACGA ATCACCGGCG GTTCGTCCGG CGGCGCCGCT GCCGCACTGG CAGCCGGTCT CTGCATGGGC GCGTTGGGCA GCGATACCGG CGGCAGCATC CGTATTCCGG CGTCCCTCTG CGGTATCGTT GGTCTCAAGC CAACCTTTGG GCGGGTAAGC CTGCAAGGGG TTATTCCGCT GAGCTGGAAC CTCGACCACG CCGGACCGAT GGCGCGCACC GTGACCGACG CCGCATTGCT GCTCCAGGCA ATTGCCGGAT ATGATCCGGA CGATCCGGTG AGCGTTGCGC TGCCGGTCGA TAATCTGCTC GCAACGCTCG ATGCAGGCGT GACCGGATGG CGTATCGCCC TGGCAACCGA TGCACACTTC GGTGAAGCCG ATCCGGAGGT GATCTCCGCC GTCCGTCGCG CGGCAACCGT TTTCGAGGAA CTGGGCGCCC GCGTGGAAGC GGTTGATCTC AGCCAGGGGC GTGAAGCAGC GCAAATGAAC GCGCTGATGA CAACCAGCGA TGCAGCCGCA TTCCACCGCG ACCGTCTGCG CGATCACCCG CACCGGTTCG GCGCCGATGT ACTGGCGCGT ATGGAACGTG GCGCACAGTT CACGTCGACC GAGTATATCC TGGCGCGTCG CTTTCAGAGC GAATGGCGCC GACGCCTGGA ACGCCTCTTC GATCAGTTCG ATCTGTTGTT GACGCCTGCC ACACCGATCA CTGCGCCGGT CATCGAAGGG CTGGATTCAA TCGAAGCGGC GCGTCAGTTG ACCCGCTGCA CCGCGCCGTT CAATCTCGCC GGTCTCCCTG CGCTCTCGCT GCCGTGCGGT CTGAGCGCCG CAGGATTGCC GATCGGGTTG CAGATCGTTG CCGCGCCCTG GAACGAAGCG CGGGTGCTGC GCGCAGGCAG GGCTTTCGAG AACGCAACGC AATGGCATCG CCAGACTCCG CCGGGATGGT GA
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Protein sequence | MSDLTHLTIA EAADLLARRE IAAVELTEAH LRRIDAHDAR LNSFITITSD HALTQARAAD AELTRGIRRG PLHGIPLALK DLYDTAGIRT TAGSTFFADR VPDTDARAVT LLYQAGAVLL GKLNMHEWAL GVTNINPHYG PSRNPWDPSR ITGGSSGGAA AALAAGLCMG ALGSDTGGSI RIPASLCGIV GLKPTFGRVS LQGVIPLSWN LDHAGPMART VTDAALLLQA IAGYDPDDPV SVALPVDNLL ATLDAGVTGW RIALATDAHF GEADPEVISA VRRAATVFEE LGARVEAVDL SQGREAAQMN ALMTTSDAAA FHRDRLRDHP HRFGADVLAR MERGAQFTST EYILARRFQS EWRRRLERLF DQFDLLLTPA TPITAPVIEG LDSIEAARQL TRCTAPFNLA GLPALSLPCG LSAAGLPIGL QIVAAPWNEA RVLRAGRAFE NATQWHRQTP PGW
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