Gene RoseRS_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3083 
Symbol 
ID5210051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3876334 
End bp3877725 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content64% 
IMG OID640596674 
Productamidase 
Protein accessionYP_001277396 
Protein GI148657191 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR02715] amidohydrolase, AtzE family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0269706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC TCACCCATCT GACAATCGCC GAAGCCGCCG ATCTGCTGGC GCGGCGTGAG 
ATCGCCGCAG TCGAATTGAC TGAAGCGCAC CTGCGTCGGA TTGACGCCCA CGACGCCCGC
CTTAACAGTT TCATCACCAT CACTTCTGAC CACGCGCTCA CACAGGCGCG CGCTGCCGAT
GCTGAGCTGA CTCGCGGCAT CCGGCGCGGT CCGTTACACG GCATCCCGCT TGCGCTGAAA
GACCTGTACG ATACTGCTGG CATTCGCACC ACCGCTGGCT CGACATTCTT CGCCGACCGC
GTCCCCGACA CCGATGCCCG CGCTGTGACG CTGCTCTACC AGGCAGGCGC AGTGCTCCTC
GGTAAACTGA ATATGCACGA GTGGGCGCTG GGAGTGACCA ACATCAATCC GCACTACGGT
CCTTCGCGCA ACCCCTGGGA TCCATCACGA ATCACCGGCG GTTCGTCCGG CGGCGCCGCT
GCCGCACTGG CAGCCGGTCT CTGCATGGGC GCGTTGGGCA GCGATACCGG CGGCAGCATC
CGTATTCCGG CGTCCCTCTG CGGTATCGTT GGTCTCAAGC CAACCTTTGG GCGGGTAAGC
CTGCAAGGGG TTATTCCGCT GAGCTGGAAC CTCGACCACG CCGGACCGAT GGCGCGCACC
GTGACCGACG CCGCATTGCT GCTCCAGGCA ATTGCCGGAT ATGATCCGGA CGATCCGGTG
AGCGTTGCGC TGCCGGTCGA TAATCTGCTC GCAACGCTCG ATGCAGGCGT GACCGGATGG
CGTATCGCCC TGGCAACCGA TGCACACTTC GGTGAAGCCG ATCCGGAGGT GATCTCCGCC
GTCCGTCGCG CGGCAACCGT TTTCGAGGAA CTGGGCGCCC GCGTGGAAGC GGTTGATCTC
AGCCAGGGGC GTGAAGCAGC GCAAATGAAC GCGCTGATGA CAACCAGCGA TGCAGCCGCA
TTCCACCGCG ACCGTCTGCG CGATCACCCG CACCGGTTCG GCGCCGATGT ACTGGCGCGT
ATGGAACGTG GCGCACAGTT CACGTCGACC GAGTATATCC TGGCGCGTCG CTTTCAGAGC
GAATGGCGCC GACGCCTGGA ACGCCTCTTC GATCAGTTCG ATCTGTTGTT GACGCCTGCC
ACACCGATCA CTGCGCCGGT CATCGAAGGG CTGGATTCAA TCGAAGCGGC GCGTCAGTTG
ACCCGCTGCA CCGCGCCGTT CAATCTCGCC GGTCTCCCTG CGCTCTCGCT GCCGTGCGGT
CTGAGCGCCG CAGGATTGCC GATCGGGTTG CAGATCGTTG CCGCGCCCTG GAACGAAGCG
CGGGTGCTGC GCGCAGGCAG GGCTTTCGAG AACGCAACGC AATGGCATCG CCAGACTCCG
CCGGGATGGT GA
 
Protein sequence
MSDLTHLTIA EAADLLARRE IAAVELTEAH LRRIDAHDAR LNSFITITSD HALTQARAAD 
AELTRGIRRG PLHGIPLALK DLYDTAGIRT TAGSTFFADR VPDTDARAVT LLYQAGAVLL
GKLNMHEWAL GVTNINPHYG PSRNPWDPSR ITGGSSGGAA AALAAGLCMG ALGSDTGGSI
RIPASLCGIV GLKPTFGRVS LQGVIPLSWN LDHAGPMART VTDAALLLQA IAGYDPDDPV
SVALPVDNLL ATLDAGVTGW RIALATDAHF GEADPEVISA VRRAATVFEE LGARVEAVDL
SQGREAAQMN ALMTTSDAAA FHRDRLRDHP HRFGADVLAR MERGAQFTST EYILARRFQS
EWRRRLERLF DQFDLLLTPA TPITAPVIEG LDSIEAARQL TRCTAPFNLA GLPALSLPCG
LSAAGLPIGL QIVAAPWNEA RVLRAGRAFE NATQWHRQTP PGW