| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3078 |
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| Symbol | |
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| ID | 5210046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3868192 |
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| End bp | 3869250 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596669 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_001277391 |
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| Protein GI | 148657186 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR00978] aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0187789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00258994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCACA AACGATTACC AGTCGCTATT CTTGGCGCCA CAGGCGCCGT TGGTCAGCGG
ATGGTGCAAC TCCTGGCGGA TCACCCGTGG TTCGAGATTG CTGTATTGAC CGGTTCAGAC
CGGACGATTG GGCGTCCCTA CGGCGAATTG GTGCGCTGGA TACTCGATAC GCCGATTCCA
GAACGGGTAG CAAAGATGAT CGTTCAGCCA ACTGAGGCGG TGGCTGATGT TGCAATTGCG
CTATCGGCGC TGCCGACAGA TGTGGCGCGT GAGGCGGAAC CGCTCTGGGC GGCGCGCACT
GCTGTCTGCT CGAATGCGTC CGCCTACCGC GCAGTCGCCG ATGTGCCGCT GATCATCCCG
GAGGTCAATC CCGATCAACT GGCGCTGATC GAACGTCAAC GCACCGAACG CGGCTGGCAG
GGATGCCTGG TGACCAACCC GAACTGTGCG ACGATCAGCG CGGTGATGCC GTTGAAGCCG
CTCCACGATG CATTCGGTTT GCAGAAGGCG CATATCAGCA CGCTCCAGGC GGTATCCGGC
GCCGGGTATC CCGGTGTAGC GTCGCTCGAC ATTATCGACA ATATCATCCC GAACATCGCC
GATGGCGGCG AAGAGGCGAA GATTGAGTCC GAGCCGCGCA AATTGCTTGG CAGAGTTGTG
GAAGGTCAGG TTATCGAGAC GCAGATCGCC ATCAGCGCAC AGGTGACCCG TGTTCCGATC
ATCGATGGAC ATACAGCGCT GATCGCGGCA TCGTTTGCGC AGAAACCGTC GCCGGAGGAG
GCGCTGGCGG TGCTGGAAGC ATTCACGCCG CCTGAGATTG TGCGTCACCT GCCGAGTTCG
CCGGAACGCG CACTCATCGT TCACCGCGTC GGCGACCGTC CCCAACCCCG TCGTGACCGT
GATGCCGGGC GCGGTATGAG CGCCAGCGTC GGGCGGGTGC GCGCCTGCCC GGTGCTGGAC
CTGCGCATGG TCGCGCTGTC GCACAATACC ATCCGCGGCG CAGCTGGCGG CGCTATCCTC
AACGCTGAGT TGCTTGTCGC AAGCGGCATT GTGTCGTGA
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| Protein sequence | MIHKRLPVAI LGATGAVGQR MVQLLADHPW FEIAVLTGSD RTIGRPYGEL VRWILDTPIP
ERVAKMIVQP TEAVADVAIA LSALPTDVAR EAEPLWAART AVCSNASAYR AVADVPLIIP
EVNPDQLALI ERQRTERGWQ GCLVTNPNCA TISAVMPLKP LHDAFGLQKA HISTLQAVSG
AGYPGVASLD IIDNIIPNIA DGGEEAKIES EPRKLLGRVV EGQVIETQIA ISAQVTRVPI
IDGHTALIAA SFAQKPSPEE ALAVLEAFTP PEIVRHLPSS PERALIVHRV GDRPQPRRDR
DAGRGMSASV GRVRACPVLD LRMVALSHNT IRGAAGGAIL NAELLVASGI VS
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