| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3075 |
|---|
| Symbol | |
|---|
| ID | 5210043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3864128 |
|---|
| End bp | 3865075 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640596666 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_001277388 |
|---|
| Protein GI | 148657183 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000036033 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00284668 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTATC TCATCTACGG TCCAGACGAA TATGCGCGCA GTGAGGCGCT GGCAGCACTG
AAGGCGCGTG TGCCCGCCGA CGTCGCCGAT CTGAATATGA CCACGCTCGA TGGACGGCGA
ACAACGCTCG ATGACCTGGT GACCGCCTGC GAAGCGATGC CGTTCCTCGC CGACCGGCGG
TTGGTGATCG TCTATGACCT GCTGAAGCAT CAAAAAGCCG GAAAGGAGCG TGATGAATTG
CGTGCGTACC TGGAGCGTGT GCCGGATTTC TGCGACCTGG TCTTCATAGA AAGCGAGGAT
GTGGATCGAC GCAGCGCGCT CTTCACCTTC CTGAAGAAAC ACGCCAGTGT CCACGAGTGC
CTGCCGCGCG AAGGCGCTGC ACTGCTGACC TGGTTGCATG AACGCGCGCA GTCGCTCGAC
GTTTCGCTCG ACAGAGACGC AGCGCAACGC TTGACCCTGC TGGCAGGCAA TGACGGGCGA
TTACTGGTCA ACGAACTTGC CAAACTGGCA AGTTTTGTCG GGCGTGGCGG GCGCATCACC
GTCCGCGAGG TCGATCTGCT GGTTGCCGAT ATGCAGGAGC AGAACCTGTT CGCCTTTATC
GACGACCTGA GCGCCCGCCG CCGCAGCGCA GCGCTCAGCA GTCTGCGCCG CCTGTTCGAC
GATGGTCAGG CAGCGCAGTA CATTCTGTTC ATGATGGCGC GGCAGGTACG CATCCTGCTG
GGAGTCAAAG ATCTTGTTGC ACAGCGCATG CGTCCTGATG ACATTGCGGC GCAGTTGGGG
CAGAAGCCGT TTGTCGTGCG GAAAGCGATC GAGCAGGTGC GCGGATTCAG TGATGCCGAT
CTGCGTCAGT TGCACCGGCG CCTGCTCGAA CTTGACCACG CATCAAAGAC TGGACGCGCA
GAGATTGAAG CTGGACTGGA ATTGATCGTT GCTGACATGT GCTCCTGA
|
|---|
| Protein sequence | MLYLIYGPDE YARSEALAAL KARVPADVAD LNMTTLDGRR TTLDDLVTAC EAMPFLADRR
LVIVYDLLKH QKAGKERDEL RAYLERVPDF CDLVFIESED VDRRSALFTF LKKHASVHEC
LPREGAALLT WLHERAQSLD VSLDRDAAQR LTLLAGNDGR LLVNELAKLA SFVGRGGRIT
VREVDLLVAD MQEQNLFAFI DDLSARRRSA ALSSLRRLFD DGQAAQYILF MMARQVRILL
GVKDLVAQRM RPDDIAAQLG QKPFVVRKAI EQVRGFSDAD LRQLHRRLLE LDHASKTGRA
EIEAGLELIV ADMCS
|
|---|
| |