Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3067 |
Symbol | |
ID | 5210035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3854503 |
End bp | 3855654 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596658 |
Product | ABC-3 protein |
Protein accession | YP_001277380 |
Protein GI | 148657175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0608457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00399105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATGGTC GATTGGTCTG GAAGGCAGTG TCGCATATGG AACTGTTCAC CGACATTATT CTCATCGCAA GCGTAACTGC GGTTGCCTGT GCATTGCCCG GCGTTTTCCT GGTGCTGCGC CGTGTGGCAA TGATCAGCGA TGCCATTACC CACACGGTTC TGCTGGGGAT CGTGCTGGCG TTCTTCGTTG TGCGAGACCT GACTTCGCCG ATCCTGGTCG TCGCCGCAGC TGGCGCCGGA GTGGCGACCG TGGTGCTGAT CGAACTGTTG AGTCGCTCGA ACCGGGTGCG CGAAGATGCT GCGATTGGGC TGGTTTTTCC GCTGCTGTTC AGCATTGGCG TTATCTTGAT AGCGCAGTAC GCAGGCAGTA TTCATCTCGA TGTCGATGCC GTACTGCTTG GCGAACTTGC GTTTGCACCG CTGGATCGGT TTGAGTTCGC CGGAAACGAT CTTGGTCCGC GGTCGCTCTG GCTGATGAGC GGTATCCTGA TAGTATCGCT GGCGTTGCTG ATCGCGTTCT ACAAGGAGTT GAAACTGACA ACCTTCGACG CGGCGCTGGC GTCTGCTTTT GGATTTGCGC CAGCGGCTTT GCATTACGGT CTGATGAGCG TGGTATCGCT GACGGCAGTA GGCGCCTTCA ATGCCGTCGG TTCGGTGCTG GTCGTGGCAT TGATGGTTGC ACCGCCGGCT GCCGCCTATC TGTTAACTGA TCGTTTGTCG CGTCTGCTGG CATTGAGCGC TCTGTTTGGC GCGCTGGCGG CAAGCCTGGG GTGCTGGGCG GCATTCGCGC TCAATGCGTC GATTGCCGGC GCCATGGCAG TGATGGCGGG ATTGATCTTC TGTCTGGCAT GGATGTTTGC CCCGCAACGC GGTCTGCTGG CGCAGGTATT GCGGCGCATC CGTCAGCGAT GGGAGTTTGC TCAGGCGATG CTGGCGGTGC ATCTGCTGCA CCACCAGGCA ACGGCGCAGG CAGCGGTTGA GTGTCAGGCT GCGCATCTCA GCGAACATCT GAACTGGGCG CCCGCATTTA CGGAACGGGT GGTGCGTCGT GCTGAACAGC GCGGCTTGCT GGTGCAGCAG AATGGCATGC TTATATTGAC CGATCAGGGG CGGCGTTTTG TGGCGACGAT CCTGGGGGGA GATAGGCTGT AA
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Protein sequence | MDGRLVWKAV SHMELFTDII LIASVTAVAC ALPGVFLVLR RVAMISDAIT HTVLLGIVLA FFVVRDLTSP ILVVAAAGAG VATVVLIELL SRSNRVREDA AIGLVFPLLF SIGVILIAQY AGSIHLDVDA VLLGELAFAP LDRFEFAGND LGPRSLWLMS GILIVSLALL IAFYKELKLT TFDAALASAF GFAPAALHYG LMSVVSLTAV GAFNAVGSVL VVALMVAPPA AAYLLTDRLS RLLALSALFG ALAASLGCWA AFALNASIAG AMAVMAGLIF CLAWMFAPQR GLLAQVLRRI RQRWEFAQAM LAVHLLHHQA TAQAAVECQA AHLSEHLNWA PAFTERVVRR AEQRGLLVQQ NGMLILTDQG RRFVATILGG DRL
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