Gene RoseRS_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3067 
Symbol 
ID5210035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3854503 
End bp3855654 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content59% 
IMG OID640596658 
ProductABC-3 protein 
Protein accessionYP_001277380 
Protein GI148657175 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0608457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00399105 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGATGGTC GATTGGTCTG GAAGGCAGTG TCGCATATGG AACTGTTCAC CGACATTATT 
CTCATCGCAA GCGTAACTGC GGTTGCCTGT GCATTGCCCG GCGTTTTCCT GGTGCTGCGC
CGTGTGGCAA TGATCAGCGA TGCCATTACC CACACGGTTC TGCTGGGGAT CGTGCTGGCG
TTCTTCGTTG TGCGAGACCT GACTTCGCCG ATCCTGGTCG TCGCCGCAGC TGGCGCCGGA
GTGGCGACCG TGGTGCTGAT CGAACTGTTG AGTCGCTCGA ACCGGGTGCG CGAAGATGCT
GCGATTGGGC TGGTTTTTCC GCTGCTGTTC AGCATTGGCG TTATCTTGAT AGCGCAGTAC
GCAGGCAGTA TTCATCTCGA TGTCGATGCC GTACTGCTTG GCGAACTTGC GTTTGCACCG
CTGGATCGGT TTGAGTTCGC CGGAAACGAT CTTGGTCCGC GGTCGCTCTG GCTGATGAGC
GGTATCCTGA TAGTATCGCT GGCGTTGCTG ATCGCGTTCT ACAAGGAGTT GAAACTGACA
ACCTTCGACG CGGCGCTGGC GTCTGCTTTT GGATTTGCGC CAGCGGCTTT GCATTACGGT
CTGATGAGCG TGGTATCGCT GACGGCAGTA GGCGCCTTCA ATGCCGTCGG TTCGGTGCTG
GTCGTGGCAT TGATGGTTGC ACCGCCGGCT GCCGCCTATC TGTTAACTGA TCGTTTGTCG
CGTCTGCTGG CATTGAGCGC TCTGTTTGGC GCGCTGGCGG CAAGCCTGGG GTGCTGGGCG
GCATTCGCGC TCAATGCGTC GATTGCCGGC GCCATGGCAG TGATGGCGGG ATTGATCTTC
TGTCTGGCAT GGATGTTTGC CCCGCAACGC GGTCTGCTGG CGCAGGTATT GCGGCGCATC
CGTCAGCGAT GGGAGTTTGC TCAGGCGATG CTGGCGGTGC ATCTGCTGCA CCACCAGGCA
ACGGCGCAGG CAGCGGTTGA GTGTCAGGCT GCGCATCTCA GCGAACATCT GAACTGGGCG
CCCGCATTTA CGGAACGGGT GGTGCGTCGT GCTGAACAGC GCGGCTTGCT GGTGCAGCAG
AATGGCATGC TTATATTGAC CGATCAGGGG CGGCGTTTTG TGGCGACGAT CCTGGGGGGA
GATAGGCTGT AA
 
Protein sequence
MDGRLVWKAV SHMELFTDII LIASVTAVAC ALPGVFLVLR RVAMISDAIT HTVLLGIVLA 
FFVVRDLTSP ILVVAAAGAG VATVVLIELL SRSNRVREDA AIGLVFPLLF SIGVILIAQY
AGSIHLDVDA VLLGELAFAP LDRFEFAGND LGPRSLWLMS GILIVSLALL IAFYKELKLT
TFDAALASAF GFAPAALHYG LMSVVSLTAV GAFNAVGSVL VVALMVAPPA AAYLLTDRLS
RLLALSALFG ALAASLGCWA AFALNASIAG AMAVMAGLIF CLAWMFAPQR GLLAQVLRRI
RQRWEFAQAM LAVHLLHHQA TAQAAVECQA AHLSEHLNWA PAFTERVVRR AEQRGLLVQQ
NGMLILTDQG RRFVATILGG DRL