| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3064 |
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| Symbol | |
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| ID | 5210032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3848179 |
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| End bp | 3850974 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640596656 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001277378 |
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| Protein GI | 148657173 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01106] sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00643024 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGAGT TCCACCATTT GTCGGTCGAA CAGGTCTTTG CGGCGCTCGG TTCTGATCCC
CAGGGGTTGA GTCCTGCCGA GGCGCAAAAC CGTCTGACCC GTTACGGTCC CAACGTGTTG
CGCGAGCCGC CGCGCACGCC GCTGATCCGC ACGCTGCTGG CGCATTTTAC CCATCTGATG
GCATGGCTGC TCTGGATCGG TGAAGGTGTC GCATTCGCGG CTCAAACGCC AACGCTGGGC
ATTGCTATCT GGCTCGTCAA TGTCATCAAC GGGTTGTTCA GTTTCTGGCA AGAGTACAAA
GCTGAACAGG CGACGGCTGC GTTGCGTCGG ATGTTGCCGT CGTATGCGCG GGTACGACGT
GGTGGCGAAG AGGTGCGTAT CCTGGCGGAA CGCCTGGTTC CCGGTGATGT GCTGCTGCTT
GCTGAGGGCG ACCATATTTC GGCTGATGCA CGGTTGGTGC GTGAGACGGA ACTGTGTGTC
GATCAGTCGG CGTTGACCGG TGAAGCGCAT CCAGTACGAA AGACTGCCGA GCCTGTCAGT
GGCGAAGGTC TCTCACGGGT CGAGTTGCCA AACCTGGTGT TTGCCGGCAC AAGCGTTGTG
GCAGGCACGG GCGAGGCGGT CGTGTTCGCC ACCGGAATGC GCACGGCATT CGGTGAAATT
GCCCGCCTGA CTCAGAGCGT CGGTGATCAA CTCAGCCCGT TGCAGCGCGA AATGGAGCGC
CTGACACGCG CCGTCAGCAC GATTGCCGTC GGCGTTGGGT TGTGTTTTTT CATGCTGGCG
GTCGCTATTG CGGATATCGA TCTGGCGAAT GGATTCATCT TTGCCCTTGG CATGATCGTC
GCCTTTGTTC CTGAAGGGTT GCTGCCGACG GTCACGCTTG CACTGGCGAT GGGGACGCAG
CGCATGGCGC GACGCAATGC GCTGGTCAAG CGTCTCTCCG CCGTCGAGAC GCTTGGTTGC
ACGACGGTCA TCTGTACCGA CAAGACGGGA ACGCTGACCC AGAATGAGAT GACAGTGCGC
GACATTTGGG TTGGCGGGCG GTCCATTTCG GTCAGCGGCG TCGGATATGC GCCGGAGGGA
CAGTTCAGTG AGTGTGGCGC ACCCCTGGAA CAGCCAGCCG ACGATGCTGA ACTACGCCAG
TTGTTGTTGG CTGCCTCGCT CTGCAATGAC GCCCGCCTCA TTCCGCCAAA CGCACAGACG
CCCTCTGAGG ATCGCTGGAG CATCCTGGGC GATCCGACTG AGGCGGCGCT GCTGGTGGCG
GCACGCAAGG CGGGTATTGA GTACGAGACT GAAATGCGAC GGATGCCGCG CCTCCGCGCA
TTGCCGTTCG ACTCACGTCG CAAGCGGATG AGCGTCGTCT GCCGTCTGCC ACAGTCGGAG
GGCGCAGCGC ATCCATCCGC CGGGTTCGTG GTGTACGTCA AGGGAGCGCC GAAAGAGTTG
CTGGCGCTCT GCGCGTCCTT CGCCGCAGGC GATGTCGTCC ATCCGCTCGA CGATCCGCAG
CTTGCCCGGA TTCTTGCAGC GAATGATCAG TATGCGCGCG CCGGGTTGCG CGTGCTGGCA
GTCGCACAAC GCACACTCAA CGCGCTCCCG ATGCCCTGTG ACACCGATCA TATCGAGCGC
GACCTGACAT TCCTCGGTCT GGTCGCAATG ATGGATCCGC CACGTCCCGA AGTCGAATCA
GCCGTGGCGA CATGCCATAC CGCCGGGATT CGTATTATCA TGGTCACTGG CGATTATGGT
CTGACGGCAG AAAGCATCGC CCGGCGCATT GGCATTATCC GTGAGGCGCA CCCCCGGATT
GTCACCGGCG CTGAACTGGA CAGCATGGAT GAAGCGGCGC TGCGCGACGC GCTGATGGGT
GAAGTCATCT TCGCGCGTGT TGCGCCGGAA CACAAACTGC GCGTGGTCAA TGCCCTGCGC
GCTCAGGGGC ATGTTGTCGC CGTCACGGGT GATGGCGTCA ACGATGCTCC GGCATTGAAG
CAGGCGGATA TCGGCGTGGC TATGGGCCGC TCCGGTACGG ATGTCGCCCG TGAAGCAGCG
GATATTGTTC TGACCGACGA CAACTTCGCC TCGATTGTCA ACGCCGTCGA GGAAGGGCGC
GCAGTCTACG CCAATATCAA AAAGTTCGCC ACCTACATCT TCACCAGCAA TACCCCCGAG
GCGGTTCCAT TCGTGCTGTT TGCCTTCAGC GGCGGGCGCA TCCCGATTGC GCTGAATGTG
ATGCACATTC TGTCGGTTGA TCTGGGAACC GATATTGTTC CGGCGCTGGC ATTGGGCGCC
GAACCGCCAG AACCTGGCGT GATGGATCGT CCGCCGCGCA GCCTGCACGA TCACGTGGTA
ACCGGTGCGA TGTTGCGCCG CGCCTATTTC TGGCTTGGAC CGGTGCAGAG CCTGGCGGCG
ATGTCGGCGT TCTACTACCA GTACTGGACG AATGGATATT GGGGGCGGTG GCTCGATCTG
CCATCAAGTG GACCGTTGTA CCGTTCGGCG ACGGCGATGG CGCTGGCGGC AGTGGTGACG
ACGCAAATCG GGAATCTGTT TGCACAACGG AGCGAACGGC TCTCGTTCCT GCGTTTGCCG
CCGACAGGCA ACCGGTTGAT CTGGATCGGC ATTGCCACTG AGCTGATCCT GATCGTAGCG
ATTGTATATG TGCCGTTCTT GCAGGAGATC ATTGGCACAG CTGCGTTCGA TCCGATCAAC
TGGGTCTTTC TGGCGCTCTG GGCGCCAGCG TTGCTGCTGG TAGACGAGAT GCGCAAATGG
TTGATCGCCC GGCGTGAGCG GTCGTTGCGC CGGTGA
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| Protein sequence | MMEFHHLSVE QVFAALGSDP QGLSPAEAQN RLTRYGPNVL REPPRTPLIR TLLAHFTHLM
AWLLWIGEGV AFAAQTPTLG IAIWLVNVIN GLFSFWQEYK AEQATAALRR MLPSYARVRR
GGEEVRILAE RLVPGDVLLL AEGDHISADA RLVRETELCV DQSALTGEAH PVRKTAEPVS
GEGLSRVELP NLVFAGTSVV AGTGEAVVFA TGMRTAFGEI ARLTQSVGDQ LSPLQREMER
LTRAVSTIAV GVGLCFFMLA VAIADIDLAN GFIFALGMIV AFVPEGLLPT VTLALAMGTQ
RMARRNALVK RLSAVETLGC TTVICTDKTG TLTQNEMTVR DIWVGGRSIS VSGVGYAPEG
QFSECGAPLE QPADDAELRQ LLLAASLCND ARLIPPNAQT PSEDRWSILG DPTEAALLVA
ARKAGIEYET EMRRMPRLRA LPFDSRRKRM SVVCRLPQSE GAAHPSAGFV VYVKGAPKEL
LALCASFAAG DVVHPLDDPQ LARILAANDQ YARAGLRVLA VAQRTLNALP MPCDTDHIER
DLTFLGLVAM MDPPRPEVES AVATCHTAGI RIIMVTGDYG LTAESIARRI GIIREAHPRI
VTGAELDSMD EAALRDALMG EVIFARVAPE HKLRVVNALR AQGHVVAVTG DGVNDAPALK
QADIGVAMGR SGTDVAREAA DIVLTDDNFA SIVNAVEEGR AVYANIKKFA TYIFTSNTPE
AVPFVLFAFS GGRIPIALNV MHILSVDLGT DIVPALALGA EPPEPGVMDR PPRSLHDHVV
TGAMLRRAYF WLGPVQSLAA MSAFYYQYWT NGYWGRWLDL PSSGPLYRSA TAMALAAVVT
TQIGNLFAQR SERLSFLRLP PTGNRLIWIG IATELILIVA IVYVPFLQEI IGTAAFDPIN
WVFLALWAPA LLLVDEMRKW LIARRERSLR R
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