| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3059 |
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| Symbol | |
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| ID | 5210027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3842132 |
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| End bp | 3844057 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596651 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001277373 |
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| Protein GI | 148657168 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00716616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGGGT CTGGTGTGGA TGCAGCTGAA CGGATCAGTC TGCTCCTCAT CGAGGACGAT
GAGTCGCATG TTGCGCTGAT CGAGCGCGCC TTCGAGTCAT GGCGATCATT GTTCGATCTG
TCGGTTGTGC ACACGTTGCA GGAGGCATAC GCGCTGCTCT CCGGTGATTC GTCCGACTTC
GATCTGATCG TGTGCGATTG GCGATTGCCC GACGGCGAAG GGTTGGAACT GCTGGACTTC
AACCGTGCGC TGCCGGTCAT TCTGATGACC GGGTATGGCG ATGAACGGGT GGCAGTCGAA
GCGATCCGTT CTGGCGCGCT CGATTATATT GTGAAGAGTG ATGCCGCATT CGCCGATCTG
CCCCATGTGG CGCAGCGTGC CATCCGCCAG TGGCGGGCGA TCCAGGCGCA ACGTCGCGCC
GAACAGGAGT TGCGCGAAAT TGAGGCGCGC TACCGCCTCA TTACCGAGAA CACGTCTGAT
CTGATCGCCA TTCTCGACGA CCAGCACCAC TTCCAGTACA TCAGCCCTTC GGTCACGACG
CTGTTGGGGC ATACCGCAGA AGCGTTGGTC GGACAGGATG CATTCTTCCT TATCCATCCC
GATGACCTTC CGTACAGCGA GGAGTACTGG TGCACCATGC TCCAGCGTAC CCGCGCCACT
GCGACGTTTC GCTATCGTCA TGCCAGCGGC GCCTGGCGCT GGATCGAATG CAATATCAGG
GCGGTCGAGC AAGGCGGCGG GTTGACGGCG ATTGTCGTGG GGCGCGATAT TACCGAGCGC
CGTGAACTGG AAGAACGTTT ACTCCAGATC CAGAAAATGG ATGCGCTTGG TCGGTTGTCG
GGCGGCATTG CGCACGATTT CAACAACATG CTGGCAGTGA TTGCCGGTTG CACCGAACTG
GCGCGTCAAC TGATCCCTGA TGACCACCCG GCGACCGGAG AACTGATCGA AATCCAGCAT
GCGACCGAGC GCGCAACGGC GCTGACCCGT CAGCTGCTGG CTTTTGCGCA CCGACAGCGG
TTCGAGCCGC GCCCCATCGA TCTGAACACG CTTATTCTCG ACATGCAGAA ACTGCTGCGT
CGCCTGATCC GCGAGAATAT CACCCTGAAC ACCCGTCTTG CCCCCGATCT CTGGCTTGTG
CGCGCCGATC CTGGTCAGAT CGAGCAGGTG CTGGTCAATC TGGCGATCAA CGCGCGTGAT
GCGATGGTCG ATGGCGGTGT GTTGACGATT ACAACCGAAA ATGCTGTGAT CGACGATGCG
TTCGACAACC GCCATCCTTC GCTGAATCCG GGCATGTATG TCCGGTTGAC GGTCAGTGAC
ACCGGCGTCG GCATGGACGA AGAAACGCGC AGGCGCGCCT TCGAGCCGTT CTTTACCACG
AAGAAGCCCG GCGAGGGAAC CGGTCTCGGT CTGGCGACCT GCTACGGGAT TGTCGTCCAG
CACGGCGGCG CCATCGAACT GACGAGCGAA CCGGGATGCG GCACAACGGT CATTATCTAT
CTGCCGCGCG CCTATCCCTC CGAAGAGACA GTCGCCCTGG AGACTGGCGA GCACATCGAT
CTCAAAGGCT CGGAAACGAT CCTGCTGGTC GAGGATGATC CGGCGGTGCG CACGCTGACA
GCGCGGGTGC TGCGCACCCA TGGGTATACC GTTCTGGAAG CGGGTGACGG ACATGAAGCG
TTGACGCTCG CCGGTGAACG TCCGATCCAC CTTCTCTTGA GTGACCACGT TATTCCGCAT
ATGAGTAGTG AGTCGCTGGC ACACTATCTG ACCGCTCTGA TCCCGCAGAT GAAGGTGCTC
TTTATGAGCG GGTATGTCGT TGAGCCGCGC CCCGATGTTC AGGCGCTCCA GGAAGCGACG
GTTCTTCAGA AGCCATTCAC TCCAACTGCG CTCCTTCAGA GGGTTCGCGC TGTCCTGGAT
TCGTGA
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| Protein sequence | MMGSGVDAAE RISLLLIEDD ESHVALIERA FESWRSLFDL SVVHTLQEAY ALLSGDSSDF
DLIVCDWRLP DGEGLELLDF NRALPVILMT GYGDERVAVE AIRSGALDYI VKSDAAFADL
PHVAQRAIRQ WRAIQAQRRA EQELREIEAR YRLITENTSD LIAILDDQHH FQYISPSVTT
LLGHTAEALV GQDAFFLIHP DDLPYSEEYW CTMLQRTRAT ATFRYRHASG AWRWIECNIR
AVEQGGGLTA IVVGRDITER RELEERLLQI QKMDALGRLS GGIAHDFNNM LAVIAGCTEL
ARQLIPDDHP ATGELIEIQH ATERATALTR QLLAFAHRQR FEPRPIDLNT LILDMQKLLR
RLIRENITLN TRLAPDLWLV RADPGQIEQV LVNLAINARD AMVDGGVLTI TTENAVIDDA
FDNRHPSLNP GMYVRLTVSD TGVGMDEETR RRAFEPFFTT KKPGEGTGLG LATCYGIVVQ
HGGAIELTSE PGCGTTVIIY LPRAYPSEET VALETGEHID LKGSETILLV EDDPAVRTLT
ARVLRTHGYT VLEAGDGHEA LTLAGERPIH LLLSDHVIPH MSSESLAHYL TALIPQMKVL
FMSGYVVEPR PDVQALQEAT VLQKPFTPTA LLQRVRAVLD S
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