| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3053 |
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| Symbol | |
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| ID | 5210021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3832572 |
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| End bp | 3834950 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640596645 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001277367 |
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| Protein GI | 148657162 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0646042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCGCC TGGTTGTAGC GGCTTTGCTG ATCGGGTTCC TGATCGCCGT TGATCCGCCG
CGAGCGCTGG CTCAGGCGCC GGTGCAGTCG GGGCGGATTG TGTTCAGCAC CCAGGCGGAC
TGGCAGCGTG GCGCGCGCAC CGATGTCCAG ATCATTGCCA ATGCCGATGG CGAATTGCGT
TTGACTGCTG GCGCAACGCG CGGAACGTTC GTCTCTGAAC CGATTTCGCT CACGATGACC
CTGAATGCGG TCGGCGCTAT CTGGCATGCG GACGTTCCGC CTGGAACAAA CCTGACTCTC
GACATTCGCG GCGGACCTGC TCCCGATCAA CTGGGACCGT GGCAACCGCT GGTTGCCGGC
GAACTGCGCG CCAGGGCGCT GCCAGATACT TTTGCAACCG AGGATGTGCG CCCGCTGCCG
CCGGATACGC GCGTCCTGCA ATTCCGTGCG ACGCTGAGCA GCACAGTCGC AAACGCTTCA
CCGCTGCTGA GCGACATCAG TATCACTTAC TTCGATGCCA GCGCCGGTCC GCCGCGCGCA
ACCGATGCCA TTACGGCGTT TGGCGGTCCA GCAACGCTGA CGCCGCCGCC GAAGGTGTTT
CCGCGCACCT CGTGGGCTGG TGGTAATCCG CGCACGTACC GCGGCGCACG GTCTGCGCCC
CAGGGGATCG TGCTGCACCA GATAGGCGCA GATGCACTCG ACAATCCCCT GCCATTCCTG
CGCGCGCTTG CCGCGTACCA CGAACAGACG CTTGGGCTGA ACGATACGAT TTATCACTAC
ATCATCGGGC GCGATGGCGC CATCTTCGAA GGACGCAGCG GCGGACCGAC CGTTTCCGTC
GCCGAGGTGA GCGGTGGTGC GGCAGTGCAT ATTGCGCTGA TCGGGGAGGG ATCGCCGCCG
ACTGCGCAAC TCGATGCACT GCGTACACTG CTGGCATGGC TTTGTGAAGC GTATCGCATC
GACCCGACCG GTCAGCGGAT CGTGACGCTG AATGGCGCTG GCGTGGTGGG ACCGGCAATC
GCCGCTCACA GCGATCTGGC GCCGAATGCT GGCGATCCTT CCAGCGCGCT TCGTGATGGG
TTGCCCCAGA TCCGGCGCAC GGTCAGCGCC GCGATCGTTC GTTCGCGCTG GTTCTTCGCG
GAAGGGAACC CGCGTGACTA CGAAGAACGC CTGGCGGTGC TCAATCCCGG AGATGAATCT
GCAAATGTGC GTTTTATTAT TGTGCGTCAA CCCGGCGCCG AAATCATCCG TGACGTGACC
ATCGCTCCCG GCGCACGCGC CAATCTGGTC ATCAATGAGA TCTTCAACGA TACCCCCGAT
GCCCCGGCGA TCATCGAAGC GAACGCGCCA GTGATCGCCG AACGCTTCAT GAACTTTGGC
GCCGACCTGA GTGTGCAACC AGGGATCATG CGTCCATCGC GCGTCTGGTA CTTTGCAGAA
GGATCGACCG AGGGAGACAA ACGCACGTTT CTGGTGCTGT TCAATCCGCA GTCCGAGCCG
GTTGGCGCGC GCGTGCTGCT GATGACAGAC GATGGTACGA CCTTTGTCTA TCCGCCATTC
GATAGCGAAC CGATCACGCT GGCGCCACAG CAGCGCATCG TGGTGGTAAT GGGTGACCTG
CTGCCGAACC GATCGTTTGG TATGCGCGTC ACCGCCACCC AACCCATTGT CGCCGAACGC
ACGATGATCT TCGGTCCCGG CAGCACACTT ACCAGCGGCG GGATGCACAT ATCGCCGGGG
GTGACCGAAC TTTCGCGCGA ATGGCACTTT GCCGAAGGAA CCACGGCGCG GCCGTTTCGC
ATGTCGCTGC TGGTAGTGAA TCCAAACGGC GATCGGGCGA ATATCACGGT GCGCTTCCTG
ACCCCTGATG GCACCTCGCT TGCGCGGCGC TATGCGATCC CGCCGCTGGC GCGCCTTGCG
ATCGATGTCA ACGAGGTTGT GCCGGAACTG GGCGTCGCCA CAACGATCAT CGCCGACCGC
CCCATCGCCG CAGAACGGGC GCTCTACTGG CGAAACGGGG CAGTGGGGAC GGCAGGACCG
GGCGCGGTGG CGCCGGCGTA CTCCTGGCGC TTCGCCGATG GGCGCACGAG CGGCGACTAC
CAGCAGTACC TGTTGATCAG CAACCCTTCA CAGCGTCAGG CGCGTATCGA TGTCGCCTTC
ATCCTGGCGG ACGGCTCCCG CGCCAGTCGT TCCCTGGTGA TGCCCGCCGG TTCACGGTAC
ACGATGGCAG TCCATGAACT GTATCCCGAT CAGACGACCA TTTCGACGAC GGTACGCGCG
ACCCAACCAA TTGTCGTGGA ACGCTCGATC TATGCTGGCG CTCCGACTTC CGCTGGTAAT
CGCGGCGGTG AAACATCGCT CGGTGTGCCG GATGATTGA
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| Protein sequence | MYRLVVAALL IGFLIAVDPP RALAQAPVQS GRIVFSTQAD WQRGARTDVQ IIANADGELR
LTAGATRGTF VSEPISLTMT LNAVGAIWHA DVPPGTNLTL DIRGGPAPDQ LGPWQPLVAG
ELRARALPDT FATEDVRPLP PDTRVLQFRA TLSSTVANAS PLLSDISITY FDASAGPPRA
TDAITAFGGP ATLTPPPKVF PRTSWAGGNP RTYRGARSAP QGIVLHQIGA DALDNPLPFL
RALAAYHEQT LGLNDTIYHY IIGRDGAIFE GRSGGPTVSV AEVSGGAAVH IALIGEGSPP
TAQLDALRTL LAWLCEAYRI DPTGQRIVTL NGAGVVGPAI AAHSDLAPNA GDPSSALRDG
LPQIRRTVSA AIVRSRWFFA EGNPRDYEER LAVLNPGDES ANVRFIIVRQ PGAEIIRDVT
IAPGARANLV INEIFNDTPD APAIIEANAP VIAERFMNFG ADLSVQPGIM RPSRVWYFAE
GSTEGDKRTF LVLFNPQSEP VGARVLLMTD DGTTFVYPPF DSEPITLAPQ QRIVVVMGDL
LPNRSFGMRV TATQPIVAER TMIFGPGSTL TSGGMHISPG VTELSREWHF AEGTTARPFR
MSLLVVNPNG DRANITVRFL TPDGTSLARR YAIPPLARLA IDVNEVVPEL GVATTIIADR
PIAAERALYW RNGAVGTAGP GAVAPAYSWR FADGRTSGDY QQYLLISNPS QRQARIDVAF
ILADGSRASR SLVMPAGSRY TMAVHELYPD QTTISTTVRA TQPIVVERSI YAGAPTSAGN
RGGETSLGVP DD
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