| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3048 |
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| Symbol | |
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| ID | 5210016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3826423 |
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| End bp | 3827553 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640596640 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001277362 |
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| Protein GI | 148657157 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0112138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.392847 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAG TTGCAAAAGA TGCACAACCG CAAACTGATC GTGTGCGCAC GTTCGAAGAT
GTCGGGCAAC TTTCGCAGGT TCAGTTGATC TGGCGGCGGT ACCGGAAGAA CCATCTCTCG
GTCGCTGGCG GGATCGTGTT GATCATTATG TATCTGATGG CGTTTTTTGC CGATTTTATC
GCGCCATACG ACCCGAATGA GATCGATGCG AACCATCAAT ATGCGCAGCC ATCGACGATT
GTCTGGGCGA ATGGCGGGCT GGCGCTTCAG GGAATGAAAC AGATTGTCGA CTCGGTCAAT
TTCCAGATCA TCTACGAGCC TGATCCAGAG GTGACCTACC CTATCCGTCT GTTTGTGCGC
GGCAGTCCGT ATGTGATGTG GGGCTTCATT CCGCTCGATA TACACCTGTT CGGCGTCGAT
GCGCCACCCG AAGCCAATGC CAAAATCTTT CTCTGGGGCG CCGACCGCCA GGGTCGCGAT
CTCTTCTCGC GGGTGCTCAA AGGAGCGCAG GTATCGCTGA CCATTGGCTT TTTCGGCGTG
ATGATCAGTA TGGTGATCGG CTCGATCGTC GGTACGGCGT CCGGGTACTT CGGCGGATGG
ATCGATAATA TCATTCAGCG GCTGATTGAG TTAATTCAGA CCTTTCCCTT TATTTCGTTA
TTCATTGCGA TTGCGGCAGC GCTTCCGATT ACGATGCCGG TGGTGCAGCG GTATATGCTG
ATCACCATCA TTCTGGCGTT CATTACCTGG ACGAGTTTTT CGCGCGAGGT GCGCGGCAAG
GTGCTGAGCT ACCGTAATGC TGACTACACT GCGGCGGCGA TTGCTGCGGG CGCATCGCAC
TGGCGTGTCA TCACCACCCA TATGCTGCCA AACGCAATGA GCCATATTAT TGTCGTTGCG
TCGTTTGCCG TGCCCGGCGC TATCGCGGCG GAAACGGCGC TCAGTTTTCT CAACCTGGGC
ATGCTGCCGC CTGCGGTCAG TTGGGGTGTA CTGCTGCAAG ATGCGCAGCA GATCAAATCG
GTGACCCTCT ATCCTTGGCT GCTGATCCCC CTCGGCGCTA TCGTTCTTGC GTCACTCTGC
CTGTACCTGC TGGGCGACGG GTTGCGCGAT GCGGTCGATC CGTATGCGTG A
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| Protein sequence | MATVAKDAQP QTDRVRTFED VGQLSQVQLI WRRYRKNHLS VAGGIVLIIM YLMAFFADFI
APYDPNEIDA NHQYAQPSTI VWANGGLALQ GMKQIVDSVN FQIIYEPDPE VTYPIRLFVR
GSPYVMWGFI PLDIHLFGVD APPEANAKIF LWGADRQGRD LFSRVLKGAQ VSLTIGFFGV
MISMVIGSIV GTASGYFGGW IDNIIQRLIE LIQTFPFISL FIAIAAALPI TMPVVQRYML
ITIILAFITW TSFSREVRGK VLSYRNADYT AAAIAAGASH WRVITTHMLP NAMSHIIVVA
SFAVPGAIAA ETALSFLNLG MLPPAVSWGV LLQDAQQIKS VTLYPWLLIP LGAIVLASLC
LYLLGDGLRD AVDPYA
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