Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3039 |
Symbol | |
ID | 5210007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3819523 |
End bp | 3820860 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640596631 |
Product | carboxyl-terminal protease |
Protein accession | YP_001277353 |
Protein GI | 148657148 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.619443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCCT ATCGTCCTGT GCTTCGTCGT CTTGCCGCCG CGCTGGTTCT GCTGACCGTC GGGTTCATCG GTGGTTGGGT AAGCGCCACG ATCTTCGCCG ACAGCATCTC GCTCACCCGG ATTGTTCCGG TGATTGGTCC TGGACTGGTC GCCAACCAGG AGACGCCGCC ATCGCTGCGG CAGCAGTTTC GCGTCTTCTG GGAGGTGTGG AATCTGGTTG AAGCCGAGTT CTACCGGCGC GACAAGATCA ACCACACGCG CATGATCCGC GGCGCTATCA GCGGCATGCT GGGGTCGCTC GACGATCCGT ACACCGTCTA CCAGGAACCG GAGCTGGCGT CGCAGACAAA CGAGCACATG CAGGGGCGCA TGGGGGGCAT TGGAACCTAC CTGCGGATCA CCGACGGGCG CGCCTACCTC TACAAGCCGA TCAAAGGCGC GCCTGCCGAC GCCGCCGGTC TCCGGCAAGA CGATGAGATC GTCGCAATTG ATGGCGAGCC GGTAGCGCCA ATGATCGCCG GTCTCGACAT TCACGAAGCG GCGGTCAAAG TGGCGGCGAA AATCCGCGGG CAGGCTGGCA CGCAGGTGCG TCTGACCATC CGGCGGCAAC CGGGCGATCA GGAGTTCGAT ATAACCCTGA CCCGCGCCGA CATTGTGGTT CCCGGCGTCG AAGCGCAACT TGTCGATGGC GGCGTCGCCT ATATCCGCAT CATCGAATTC AAAGCCAACA CCGTTCCCGA ATTCGATCAG GCGCTGCGCG AACTGCTGCC GCAGGCGCCG AAGGGAATCG TCCTTGACCT GCGCAACAAT CCCGGCGGCT ACCTGGATCA GGCACGCGCC GTATTAGGGC GACTGTACGA CGGGGTGGCG CTCTACGAGC AGAACAGCAA AGGAGAGTTG ACCGAAATCC GCACCGTCAG CGGCGACATT CGCGCGTATG ACCTTCCTAT CGTGGTGCTG ATCAACGGCG GTTCCGCCAG CGCCAGCGAA ATTGTCGCCG GGGCGTTGCG CGACAGTCGC CCGAATGTGA CGCTGATCGG CGAAAAAACC TTTGGCAAAG GGTCGGTGCA GAACATCTAC AACCTGAGCG ACGGGAGCAG CGCGCGCATC ACCTTTGCCC ACTGGTTGAC ACCGGCGCGC ACTGAAATCG ACAAGATCGG CATCATGCCG CAGTACGTCA TTCCCTACGC CGAAGATCCG GCCACGCAGG CGCCGTGCAT TGGCGACCGG CAACCGCCGC CTGGAGCGAC CACCTGCGCC GACAATCAAC TGTTCTATGC CATCCGCCTG CTGACAACCG GCGAAAAGCC GCCATCGATG CCAGCAGCGG CGCGCTGA
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Protein sequence | MSAYRPVLRR LAAALVLLTV GFIGGWVSAT IFADSISLTR IVPVIGPGLV ANQETPPSLR QQFRVFWEVW NLVEAEFYRR DKINHTRMIR GAISGMLGSL DDPYTVYQEP ELASQTNEHM QGRMGGIGTY LRITDGRAYL YKPIKGAPAD AAGLRQDDEI VAIDGEPVAP MIAGLDIHEA AVKVAAKIRG QAGTQVRLTI RRQPGDQEFD ITLTRADIVV PGVEAQLVDG GVAYIRIIEF KANTVPEFDQ ALRELLPQAP KGIVLDLRNN PGGYLDQARA VLGRLYDGVA LYEQNSKGEL TEIRTVSGDI RAYDLPIVVL INGGSASASE IVAGALRDSR PNVTLIGEKT FGKGSVQNIY NLSDGSSARI TFAHWLTPAR TEIDKIGIMP QYVIPYAEDP ATQAPCIGDR QPPPGATTCA DNQLFYAIRL LTTGEKPPSM PAAAR
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