Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3038 |
Symbol | |
ID | 5210006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3818698 |
End bp | 3819480 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640596630 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001277352 |
Protein GI | 148657147 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCC GTCAGCGTGA TACGATTCGC AGCAACACCT ACCGTTTTTT CGTCGATCCG TCCGCGCTCG ACGGCGGGAA GGCGCGCCTG TTCGATCCCG AACTGGGGCA TCAACTGGCG GATGTGTTGC GGCTCGGTCG CGGCGATCGG ATTATCCTGC TCGATGGCGA GGGGTGGCAG TATACGGTAT CGCTGGAAGC CGTTGATCGG CGCGGCACGG TGAACGGTGC AATCGAGGCG CGTGAAGCAG CTGGCGGCGA ACCGCGCATC AATCTGACGA TCTACCTGCC GCTCATCCGA ACCGAACGTT TCGAGTGGGC GCTGCAAAAA GGGGTCGAAC TCGGAGCGGC GACATTCGTT CCGACGACCT GCGCTCGCAG TATCGACATC GCTCCCGACG AACGCAAACT GACCCGCTGG CGCCGGATCA TTCGCGAGGC TGCCGAGCAG TCGCGCCGCG GCAGACTGCC ACGCCTTACA CCGGCGATCC CGTTCGCCGA AGCCTGCGCC CAATGGGATT CGTCCGATCC GGCGCTGCTT CTGTGGGAAG GAACAGATGC GACGCCCCTC GCGCACGCCC TGCGCATCCT GCAACAGCAC ACGTCGCCGA CGTCGCTCGC GCTCTTCAGC GGACCGGAGG GCGGATTGAC CGACGATGAA CGCCAATGCG CCGGGCGCCA TGGTATCATG AGCGTATCGC TCGGTCCGCG CACACTCCGC GCCGAAACTG CGCCAATTGC TGCGACCGCG ATCATCGTGT ACGAGTTCGA CACGCACGGG TGA
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Protein sequence | MPRRQRDTIR SNTYRFFVDP SALDGGKARL FDPELGHQLA DVLRLGRGDR IILLDGEGWQ YTVSLEAVDR RGTVNGAIEA REAAGGEPRI NLTIYLPLIR TERFEWALQK GVELGAATFV PTTCARSIDI APDERKLTRW RRIIREAAEQ SRRGRLPRLT PAIPFAEACA QWDSSDPALL LWEGTDATPL AHALRILQQH TSPTSLALFS GPEGGLTDDE RQCAGRHGIM SVSLGPRTLR AETAPIAATA IIVYEFDTHG
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