Gene RoseRS_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3033 
Symbol 
ID5210001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3813561 
End bp3814778 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content59% 
IMG OID640596625 
Producthypothetical protein 
Protein accessionYP_001277347 
Protein GI148657142 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA CACTGACGTC CGCTGCACTC CGTGCAGTGC TGCTGGCATC ACAGGGGCTT 
GATCAACCGC CGCAGCGCGC GGCAACCCGG GATGACCTTC TGGAAACCAT CCGGCGGATG
GGTGCATTGC AAATCGACAC CATCCACGTG GTCGCGCGCA GCCCGTACCT GGTGCTGTGG
AGCCGCCTAG GGGCGTATGA TCCGCGCTGG TTGACCGATC TGCTGGTGGA GCGAGCAATC
TTTGAGTACT GGTCGCACGA AGCCTGTTTT CTGCCGATTG ACGATTACCC GATCTACCGG
TCACTCATGT TGGCAGGGCG CACGCGCAGC AATGCCTATG CGCGCAAGTG GTTGCACGAG
CATCAATCGA TTGCTGCTGC GCTGATCAAC GATATTCGCA ACAACGGACC GGTTCGCTCA
GCAGACTTCG TTCGCGCTGA CGACGCGAAG GGAGGATGGT GGAACTGGAA GATCGAAAAG
ATGGCGCTGG AAATGCTCTT CATTGTCGGT GATCTGATGA TTGACCGGCG AGAGAACTTT
CAGCGCGTTT ACGACCTGCG TGAGCGAGTT CTGCCTGAAT GGGACGATGC CCGTATACCT
GATGTCGAGA CAGCGCAGCG CACACTGATC CTTGCGGCAG CACAGGCGCT CGGTGCGGCG
CCAGCACGCT GGCTCGCAGA CTACTTTCGC CTGAACAAGG CAGAAACGGC GCGCATTGCC
GCTACACTGG CAGCCAATGG CGCACTCGCA ACTGCTCGTG TCGAAGGATG GCGCGATCCG
GTCTACATTC ATCCGGGCAA TCTGCCGCTG GCTCAGGCTG CCGCCGATGG CGCGCTCCGA
TCAACGATGA CGACGCTTCT CTCACCGTTC GATCCTGTCG TGTGGGATCG GCAGCGCATC
CGGGAACTGT TTGGCTTCGA CTATCGCATC GAGTGTTATA CACCTGCACC CAAACGACGC
TATGGCTATT TCACATTGCC CATCCTGCAT CGGGGCGCGC TGATCGGGCG GCTTGATCCA
AAAGCGCACC GGAAAGATGG TATATTTGAG GTCAAGGCGC TCTATATCGA GCCAGGCGTC
GATCCAGACG AAGACCTTGC GCTGGAGCTG GCGGCAGCGT TGCGCTCCTG TGCAGCATGG
CACGGCACAC CCGACGTTGT TATTCGCCAG TGTGATCCGC CAGCGTTCGG TATACTGCTG
AAACGCGCCC TCTCATAA
 
Protein sequence
MSLTLTSAAL RAVLLASQGL DQPPQRAATR DDLLETIRRM GALQIDTIHV VARSPYLVLW 
SRLGAYDPRW LTDLLVERAI FEYWSHEACF LPIDDYPIYR SLMLAGRTRS NAYARKWLHE
HQSIAAALIN DIRNNGPVRS ADFVRADDAK GGWWNWKIEK MALEMLFIVG DLMIDRRENF
QRVYDLRERV LPEWDDARIP DVETAQRTLI LAAAQALGAA PARWLADYFR LNKAETARIA
ATLAANGALA TARVEGWRDP VYIHPGNLPL AQAAADGALR STMTTLLSPF DPVVWDRQRI
RELFGFDYRI ECYTPAPKRR YGYFTLPILH RGALIGRLDP KAHRKDGIFE VKALYIEPGV
DPDEDLALEL AAALRSCAAW HGTPDVVIRQ CDPPAFGILL KRALS