Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3014 |
Symbol | |
ID | 5209982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3794264 |
End bp | 3794728 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640596606 |
Product | hypothetical protein |
Protein accession | YP_001277328 |
Protein GI | 148657123 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.157547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCATC TGTTGCTTCA GGTCGACGGT ACGCCTGGTT GCCCGCCGCG CGGTATCGCG GGGCTGGGGA TCATCGTGCG CAACCAGGCG GGCGCGGTGC TGGCGTGGTC GTGCGAACGC GCACCGGCGA CGACCAACAA CGAGGCGGAG TATCTGGCGG TCATTGCCGG GTTAACGCTG GTCATCCGGC GTTTTCCCGG CGTGGCGGTG CGGTGCCTGA CCGATAGCCG CATTGTGGTC GATCAACTCA CAGGACGGCA TGCTGTGCGA GCGATGGCGC TCAAACCGCT GCACGAACGC GCCCGTATGC TCGTCCTTCA GCACGGCAGC GTGACGTTCA TCGCCATTCC GCGCGAACTC AACCGTCTGG CGGACGCGCT GGCGTGGGAG GCGCTCGACG GACGCGGCTG GCTTGCGCGT GTCGGTCGAG AAGCGGGTCT TGCTACGGTC AACAGTGATA TGTGA
|
Protein sequence | MSHLLLQVDG TPGCPPRGIA GLGIIVRNQA GAVLAWSCER APATTNNEAE YLAVIAGLTL VIRRFPGVAV RCLTDSRIVV DQLTGRHAVR AMALKPLHER ARMLVLQHGS VTFIAIPREL NRLADALAWE ALDGRGWLAR VGREAGLATV NSDM
|
| |