| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3013 |
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| Symbol | |
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| ID | 5209981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3792897 |
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| End bp | 3794231 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596605 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001277327 |
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| Protein GI | 148657122 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.301733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTTT TTCCACGCTA CCAGGGACCG CCGCTCATGC CACAGATTTG CAGCGTCGAA
AACCTTACTC TGGCGTGGCG GCGGGTGCGG AGTAATATCC ACGTGGCGCG TCGCGGGCGC
AGCGCCGGAT TGGATGCAGT GACGCTGCGT GATTTCGAAG TCGACTGGAC GCGCCAGATG
GCGCAACTGG CGGACGAGTT GCAGCAGGGA ACGTATCGAC CGCTGCCCGC GAAGCGGGTT
GCCATTCCCA AGGCGAGCGG CGGTGAACGC GCGATCGCCA TTCTCGCCGT TCGTGATCGG
GTGGCGCAAC GCGCCGTTCA GCAGGTGCTC GATCCGCTGT TCGATCCGTG TTTTCTGGAT
TGTTCCTACG GTTGTCGTCC GTATGTCGGC GTTCCTGATG CCATTGCGCG GGTGCAGCGC
TATGCCGATC AGGGGTTGGG ATGGGTGGTT GATGCCGACA TTGCCACCTG CTTCGATAGC
CTTGATCAAC GGGTGCTGCT GAGTCTGGTG CGTCAGCGCA TCGATGAGTT GCCGGTGCTG
AAACTGATTG CGCAGTGGCT GGAAGCCGGT GTGCTTCAGG GTGAAGCGGC GTTGCCGGGT
GATACGCCGC CGACTCCGCT TCAGCGCGGC GAGGCGGCAG TGCGCCGCGC GCTGTCGTGG
GGCGCGGAGC GGCTGCATCC ACCCCCGCCT GTTGGACCGT ATGCGGCGGC GATGTGGGAG
ACGCCGGGTG GCAGCATCGG CGAAGACGGT TGGGCGCCGC GTCAGCCGGG GCTGGAATCG
CATCTCTGGA CGGCGGTAAT GCTGGCGCGT CCGGTGATTG ACGGCGCGCG ACAGGCGCTG
CCCTACCTGC AACGGATTGG CGGGCGGCGT CTTGCGGTCG CCGGCGCTGT GGCGGTTGGC
GCGCTGGCAT TGAGCGAAGC GGCTGCGCGG CTGCGTCACG CCAGCAGACG TGGCGTACCG
CAGGGAGGCG CGCTCTCGCC GTTGCTGGCG AACATCTATC TCCATCCGTT CGATGTCGCA
ATGATGGGCC AGGGGTTGCG GTTGGTGCGT TTTATGGACG ATTTTGTCGT GATGTGCGCA
ACGCAGGAAG AAGCGGAATG CGCATTGCAG TTTGCGCAGC GGCAATTGCA TATTCTGCGC
CTCACGCTGA ACGCAGAGAA GACGCATATC ACAGCGTATG CCGACGGGAT CGAATTTCTG
GGCGCCGCGC TTGCGCCGCG CGCCCGCGGG TTGCGCCTCG GCGAAGGAGT GGTCGATTTT
GCTGAAGCGG AATGCGCACT GCGCGACGCC CTTCGCAATG CGCGCCGACG GATGAAGCGC
AAGGTTGAAG GTTGA
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| Protein sequence | MPLFPRYQGP PLMPQICSVE NLTLAWRRVR SNIHVARRGR SAGLDAVTLR DFEVDWTRQM
AQLADELQQG TYRPLPAKRV AIPKASGGER AIAILAVRDR VAQRAVQQVL DPLFDPCFLD
CSYGCRPYVG VPDAIARVQR YADQGLGWVV DADIATCFDS LDQRVLLSLV RQRIDELPVL
KLIAQWLEAG VLQGEAALPG DTPPTPLQRG EAAVRRALSW GAERLHPPPP VGPYAAAMWE
TPGGSIGEDG WAPRQPGLES HLWTAVMLAR PVIDGARQAL PYLQRIGGRR LAVAGAVAVG
ALALSEAAAR LRHASRRGVP QGGALSPLLA NIYLHPFDVA MMGQGLRLVR FMDDFVVMCA
TQEEAECALQ FAQRQLHILR LTLNAEKTHI TAYADGIEFL GAALAPRARG LRLGEGVVDF
AEAECALRDA LRNARRRMKR KVEG
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