Gene RoseRS_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3007 
Symbol 
ID5209975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3775570 
End bp3776511 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID640596599 
Productputative agmatinase 
Protein accessionYP_001277321 
Protein GI148657116 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCT ATCAACCTGC CGACTCGCTT GCATCACCGC GTTTCGCCGG TATTCGCACA 
TTTGCTCGAC TACCATGCGT TCAGACAACG GAGGACGTTG ATGTGGCCGT CGTCGGATTG
CCGTTCGATA CCGGCGCAAC CTTTAAGGTT GGTGCGCGCT TCGGTCCGGA GGCGATCCGC
AGTGCGTCGG TGCTGCTGCG TCCCTACAAT CCGGAACTCG ATGTCCACGT CTTTGCAACC
CTGTCGTGCA TCGATTATGG CGATGCGCCG GTTGCGCCTG GCTTCATTCA CGAGAGTCAC
GCCGCCATTA CCGCCACCCT CCGTCCCCTG GCGGAAGCCC GCGTCGTGAC GCTCTCCCTG
GGTGGCGATC ACAGTGTGGC GCTGCCGGAA CTGCGCGCCC TGGCAGCAGT CTATGGACCG
CTGGCGCTCG TGCAGTTCGA CTCTCACGGC GATTTGTGGG ATAGTTACTA TGGCGGGCAG
AAGTACACGC ACGGCACGCC GTTCCGCCGT GCTGTCGAGG AAGGGCTGAT CCTCCCCGAA
TGTTCGGTGC AACTGGGGAT GCGCGGTCCG CTGTACGGTC CGGAGGATCT CCAGATGGCG
CGTGATATGG GGTTCGCCGT TCTGACCACA ACCGAACTCC TGGCGCGTTC GCCGCGGGAG
ATCGGTGACC TGGTGCGCAC GCGGGTTGGT GATCGCCCGG CATTCCTGTC GTTCGATATC
GATTTCTTCG ACCCGGCGTA TGCGCCTGGC ACGGGTACGC CCGAAGTCGG CGGACCGACC
AGTTTTCAGG GGCTGGCGTA CCTGCGCGCC TGCACCGGTG TGCGCTGGGT CGGCGGCGAT
GTGGTGGAAG TGTTGCCAGC GCTTGATCAC GGACAGATCA CGGCGCATCT GGCGGCGCAG
GTGGGCTATG AGTTCCTGTC GCTGGTCGCG CTTGCACGGT GA
 
Protein sequence
MPRYQPADSL ASPRFAGIRT FARLPCVQTT EDVDVAVVGL PFDTGATFKV GARFGPEAIR 
SASVLLRPYN PELDVHVFAT LSCIDYGDAP VAPGFIHESH AAITATLRPL AEARVVTLSL
GGDHSVALPE LRALAAVYGP LALVQFDSHG DLWDSYYGGQ KYTHGTPFRR AVEEGLILPE
CSVQLGMRGP LYGPEDLQMA RDMGFAVLTT TELLARSPRE IGDLVRTRVG DRPAFLSFDI
DFFDPAYAPG TGTPEVGGPT SFQGLAYLRA CTGVRWVGGD VVEVLPALDH GQITAHLAAQ
VGYEFLSLVA LAR