Gene RoseRS_3001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_3001 
Symbol 
ID5209969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3767301 
End bp3767864 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content62% 
IMG OID640596593 
Producthypothetical protein 
Protein accessionYP_001277315 
Protein GI148657110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC AACCGACACC TGAGCATAAT GATCCGCTCG CTCCACGGGA GGCGTCTGAA 
TATCCCGGTG GCGCGACCCT GTTTGAGCGT CTGCTCGAAC AGGCGCGTGA CAACAGCAGT
GGTCGGGCGC ACCGCAGCAC GCCGAACCCG AACGATGTGG AAACAGTGAT TGATCGTCTG
ATCGAACAGG CGCGCGCCGA AGGTGCGTTC GACAACCTGC CCGGCGCCGG TAAGCCGCTG
ATGTATGACG ATGATGCGCT GACGCCGGAA GATATGCGCG CCGGGTTTCG CATGCTGAAG
AACGCCGGGT TCGCCCCTCT GTGGATTGAA GCTCGCCGTG ATATTGACAC TGAGCGCGCC
CGCATCGCTG CCTGGCTCCA CGACACCAAC CGCCGCTGGT CGCGCCTTCC ACCCGCCATC
CGCGCCCGTT TGCGCGCCGA ATACCACGAG ATGCTTACCA ACCTCCAGCG TCAGATTATC
TCATACAACC TTACCGCACC ACCGGCTGCG GGTCAGATTG AGGGTCTGCG CATCGCAGAA
GAGATGCGCA AACTGGGAGA ATAG
 
Protein sequence
MTDQPTPEHN DPLAPREASE YPGGATLFER LLEQARDNSS GRAHRSTPNP NDVETVIDRL 
IEQARAEGAF DNLPGAGKPL MYDDDALTPE DMRAGFRMLK NAGFAPLWIE ARRDIDTERA
RIAAWLHDTN RRWSRLPPAI RARLRAEYHE MLTNLQRQII SYNLTAPPAA GQIEGLRIAE
EMRKLGE