Gene RoseRS_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2995 
Symbol 
ID5209963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3758662 
End bp3759309 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID640596587 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_001277309 
Protein GI148657104 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.975855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAT TGATAACCAT TCTCTTCCTG GTCTTTGCTG TGTTCATCCT TGTGGCGGCG 
ATCATGACCG TCACGGTAAA GAACATTGTG CATGCTGCAC TCTGGCTGAT CTCGTCGTTC
TTCGGCGTCG GCGCGCTCTA CCTGTTGATG GAGGCGGAGT TCCTCGGCGT GGCGCAGGTG
CTGATCTATG TCGGCGCGGT GTCGATCCTG ATCCTGTTCG CCATCATGCT GACGCGTGAC
CTGGAAGGAA GCCAGAATCG GCAACTGACA CCGCGCTGGT GGATCGCACT GCTTGTGCCA
GCAGCACTGT TCGGACTCCT GATCGTGCCG ACGGTCATGA CCCACGCATG GCAACTCCCG
CCGCCGCCGC CTGCCGGTCA ACCGCCGTCC ATCTCCGGCG CACAACAGAT CGGTACGGCA
TTTATGCGCG AATATCTTCT GCCGTTCGAA GTGGCGGCCA TCCTGCTGCT GGTTGCCATG
ATCGGCGCGA TTGTGGTCGC CTTCGAGGAG CGTGAGCAAC GACGCCGCGT GTTGACGCTG
GCGGAACAGG TGCGTCTGCG TCGGCAACGG CAGCAGCAGG TTGCAACCCT TCCTGAGCCA
GCGGTGAGCG CTGTTCAACC GTCGGAGGCC ACCGGCGGCG AGACGTGA
 
Protein sequence
MNTLITILFL VFAVFILVAA IMTVTVKNIV HAALWLISSF FGVGALYLLM EAEFLGVAQV 
LIYVGAVSIL ILFAIMLTRD LEGSQNRQLT PRWWIALLVP AALFGLLIVP TVMTHAWQLP
PPPPAGQPPS ISGAQQIGTA FMREYLLPFE VAAILLLVAM IGAIVVAFEE REQRRRVLTL
AEQVRLRRQR QQQVATLPEP AVSAVQPSEA TGGET