Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2984 |
Symbol | |
ID | 5209952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3738394 |
End bp | 3739830 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640596576 |
Product | ammonium transporter |
Protein accession | YP_001277298 |
Protein GI | 148657093 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCAGGC GACGAACAAA ACTGATGCTC GGCATTGGCG CGCTCGCCGG TCTGTTGATC GGCACAACCG GAACATCCTT TGCCCAGGAG ATCGATCCGG CGATTGCGGA AATGGGGGTT GTCACCGATA CGATGTGGCT GCTGATCGCC GCCTTCCTGG TCTTTTTCAT GCAGGCGGGC TTTGCGCTCG TCGAAGCCGG TTCCACGCAA TCCAAGAACA TGATCAACAT CATGTTCAAA AACTTTATGG ACTTCTGTAT CGCTGCGCTG GCGTTCTGGA TGATCGGTTG GGGTATCGCC TACGGCGCGA CGGTCGGCGG GTTCTTTGGA ACCGACCAGT TTTTCCTGGG AGATGTACGT GAGGCGGGGA GCGTGCCGAC TCTTGCCCTC TGGCTGTTCC AGGTGGTGTT TGCGGGAACT GCGGCGACGA TCGTGTCTGG CGCGATGGCG GAACGTACAA AGTTTGTTGC ATACCTGATC TATAGTCTGG TTATCTCGAT CCTTATCTAC CCTGTCGTGG TCCACTGGGT ATGGAGCGGC GCCGGCTGGC TCAATGACTA CGATCCGACC ACCACCGGCG ACTGGGGATT CACCGATTTC GCCGGCTCGA CAGTGGTTCA CAGTGTTGGC GGTTGGGCGG CGCTGATGGG AGCATGGCTC CTCGGTCCGC GCCTGGGGCG CTATGGTCCG GATGGCAAGC CGCGCGAAAT TCCCGGACAC AGTGCAGCGC TCGCCGGTCT GGGGGTCTTT ATTCTCTGGC TGGGATGGTA TGGCTTCAAC CCCGGCAGTC AGCTGGCGTT CAAAACCCAG GATGATGCCG ATGCGATTGC GCTGGTGGCT GTGACGACCA CGCTTGCTGC GGCTGCGGGC GCGGTTGGCG CAATGATCAC AAGCTGGATC AAGAGTGGCA AGCCGGAACT CGGCGCATCG CTGAACGGCG TGCTTTCGGG TCTGGTAGCG ATTACCGCCG GTTGCGCCTA TATGCGTCCG ATTGATGCAG TGATCGTCGG TCTGGTCGCC GGTCCGCTCT ACGTGATCTC GATGAAGTGG CTGGAGGCGC TGAAGATCGA CGACCCGGTC GGCGCGGTGC CGGTGCACCT GGTGAACGGC GTCTGGGGGA CGCTGGCGGT CGGTCTGTTT GCAACCATCG AAGGCAATAC CGGTACAGTC GGTCTGTTTG CTGGCGGCGG TCCGCAGTTG CTGATCGCTC AGATCGTCGG CGTGCTGGCA ATCGGCGTCT GGAGTGCGTT GACCAGTTTC CTGCTCTTCT TCATCATCAA GCGCACGATT GGTCTGCGCG TTTCGCCGGA AGAGGAAGAA CTCGGTCTCG ATATCGGCGA GCACGGGACG GTCGCGTACC CGGATATCCA TAAGATGCCC GAACCTGAGA CGATCCGCAC GATTACCGGG AAGCCAGCTT CCAGCACGGC TGAGTAA
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Protein sequence | MVRRRTKLML GIGALAGLLI GTTGTSFAQE IDPAIAEMGV VTDTMWLLIA AFLVFFMQAG FALVEAGSTQ SKNMINIMFK NFMDFCIAAL AFWMIGWGIA YGATVGGFFG TDQFFLGDVR EAGSVPTLAL WLFQVVFAGT AATIVSGAMA ERTKFVAYLI YSLVISILIY PVVVHWVWSG AGWLNDYDPT TTGDWGFTDF AGSTVVHSVG GWAALMGAWL LGPRLGRYGP DGKPREIPGH SAALAGLGVF ILWLGWYGFN PGSQLAFKTQ DDADAIALVA VTTTLAAAAG AVGAMITSWI KSGKPELGAS LNGVLSGLVA ITAGCAYMRP IDAVIVGLVA GPLYVISMKW LEALKIDDPV GAVPVHLVNG VWGTLAVGLF ATIEGNTGTV GLFAGGGPQL LIAQIVGVLA IGVWSALTSF LLFFIIKRTI GLRVSPEEEE LGLDIGEHGT VAYPDIHKMP EPETIRTITG KPASSTAE
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