Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2979 |
Symbol | |
ID | 5209947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3731244 |
End bp | 3731957 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596571 |
Product | ABC transporter related |
Protein accession | YP_001277293 |
Protein GI | 148657088 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTAC TCGAACTCAA AGACGTCCAC ACCTACTACG GCAATATTCA CGCCTTGAAA GGCATCTCGC TGGCGGTCGA GCCGGGTGAG ATCGTGACCC TGATCGGATC GAATGGCGCG GGGAAGAGTA CGACGCTGCG CACCATTTCC GGGCTGTTGA AGCCACGTCG TGGCGAGGTC TGGTTCCAGG GAGAACGGAT TGACCATCTC CCGCCACATA AGATCGTCGA GATGGGTGTG ATCCAGGCGC CGGAGGGACG CCGGATCTTT CCGCGCCTGA CAGTGCGCGA AAATCTGGAA ATCGGCGCAT TTCTCCGCAA AGATAAAGCC GGGATTGCCA GAGATATGGA GCGCGTCTTC CATCTCTTCC CACGCCTCTA CGAACGCCTC AATCAGCGCG GCGGCACGCT CTCCGGCGGT GAACAGCAGA TGCTCGCCAT TGGACGGGCG CTGATGGGAC AACCGCGCGT GCTGCTCCTC GATGAACCGT CCATGGGGCT TGCCCCGGTG CTGGTCGAAC AGATCTTCAG TATCATCAGC GACATTAATG CGCAGGGCAC AACAATCCTG CTCGTTGAGC AAAACGCACT GATGGCGCTG GCAATCGCCC ATCGCGGCTA TGTGCTCCAG ACGGGTGAGA TTGTTCTGGC GGATACGGCG CAGGCGCTGC GCGAGAATAC CCTTGTTCAG CATGCGTACC TGGGCGTCGG GTAA
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Protein sequence | MPLLELKDVH TYYGNIHALK GISLAVEPGE IVTLIGSNGA GKSTTLRTIS GLLKPRRGEV WFQGERIDHL PPHKIVEMGV IQAPEGRRIF PRLTVRENLE IGAFLRKDKA GIARDMERVF HLFPRLYERL NQRGGTLSGG EQQMLAIGRA LMGQPRVLLL DEPSMGLAPV LVEQIFSIIS DINAQGTTIL LVEQNALMAL AIAHRGYVLQ TGEIVLADTA QALRENTLVQ HAYLGVG
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