| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2979 |
|---|
| Symbol | |
|---|
| ID | 5209947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3731244 |
|---|
| End bp | 3731957 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640596571 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001277293 |
|---|
| Protein GI | 148657088 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTAC TCGAACTCAA AGACGTCCAC ACCTACTACG GCAATATTCA CGCCTTGAAA
GGCATCTCGC TGGCGGTCGA GCCGGGTGAG ATCGTGACCC TGATCGGATC GAATGGCGCG
GGGAAGAGTA CGACGCTGCG CACCATTTCC GGGCTGTTGA AGCCACGTCG TGGCGAGGTC
TGGTTCCAGG GAGAACGGAT TGACCATCTC CCGCCACATA AGATCGTCGA GATGGGTGTG
ATCCAGGCGC CGGAGGGACG CCGGATCTTT CCGCGCCTGA CAGTGCGCGA AAATCTGGAA
ATCGGCGCAT TTCTCCGCAA AGATAAAGCC GGGATTGCCA GAGATATGGA GCGCGTCTTC
CATCTCTTCC CACGCCTCTA CGAACGCCTC AATCAGCGCG GCGGCACGCT CTCCGGCGGT
GAACAGCAGA TGCTCGCCAT TGGACGGGCG CTGATGGGAC AACCGCGCGT GCTGCTCCTC
GATGAACCGT CCATGGGGCT TGCCCCGGTG CTGGTCGAAC AGATCTTCAG TATCATCAGC
GACATTAATG CGCAGGGCAC AACAATCCTG CTCGTTGAGC AAAACGCACT GATGGCGCTG
GCAATCGCCC ATCGCGGCTA TGTGCTCCAG ACGGGTGAGA TTGTTCTGGC GGATACGGCG
CAGGCGCTGC GCGAGAATAC CCTTGTTCAG CATGCGTACC TGGGCGTCGG GTAA
|
|---|
| Protein sequence | MPLLELKDVH TYYGNIHALK GISLAVEPGE IVTLIGSNGA GKSTTLRTIS GLLKPRRGEV
WFQGERIDHL PPHKIVEMGV IQAPEGRRIF PRLTVRENLE IGAFLRKDKA GIARDMERVF
HLFPRLYERL NQRGGTLSGG EQQMLAIGRA LMGQPRVLLL DEPSMGLAPV LVEQIFSIIS
DINAQGTTIL LVEQNALMAL AIAHRGYVLQ TGEIVLADTA QALRENTLVQ HAYLGVG
|
|---|
| |