Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2978 |
Symbol | |
ID | 5209946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3729872 |
End bp | 3730669 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640596570 |
Product | ABC transporter related |
Protein accession | YP_001277292 |
Protein GI | 148657087 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCTCC TGGAAGCACA ACATATTACC AAGCAGTTCG GTGGACTTAC TGCGGTCAAC GATGTGTCGC TCACCATCGA AGCGGGCAGT ATTGTGAGCG TTATCGGTCC TAACGGTGCG GGAAAAACGA CGTTCTTCAA TGTGTTGACC GGGATCTACA AGCCGACCAA AGGGACGATC ATCTTCGATG GTAAGGATAT TACCGGTCTG CGTCCCGACC AGATCACGGC GCTGGGGATC TGTCGCACAT TCCAGAATAT CCGCCTGTTC AACGCAATGA CCGTGCTCGA AAACGTTCAG GTCGGGATGC ACACGCGATT GAATGCCGGA TTGTGGCAGA TCATCTTTGG CACCCCCTCT GTCCGTGCCG AGGAGAAGGC ATCGCTCGAA CGGGCGCGCG AGTTGCTCCG ATTCGTCAAC CTGGACGACC AGCGTAACCA GCTGGCGCGC AATCTGCCCT ACGGTGATCA GCGCCGCCTT GAAATTGCGC GGGCACTGGC ATCTTCACCA AAACTGATCC TGCTGGATGA GCCGACCGCC GGCATGAATC CGCAGGAAAC AGCCGAAGCG ACCGATCTGA TCCGTCGGCT GCGCGATGAA CTGGGAATCA CGGTAGTGCT CATCGAGCAC GATATGCGGG TGGTGATGAC CATCTCGGAA CGCATTACCG TGCTCGACTA TGGCACCAAA ATTGCGGAGG GTCTTCCCCA CGAGATCCGT TCCAACCCGC GCGTGATCGA AGCCTACCTG GGCAAAGGCG CCGCTGCGCA CGGAATGGTG AAGGTTGAAG GTGGGTGA
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Protein sequence | MALLEAQHIT KQFGGLTAVN DVSLTIEAGS IVSVIGPNGA GKTTFFNVLT GIYKPTKGTI IFDGKDITGL RPDQITALGI CRTFQNIRLF NAMTVLENVQ VGMHTRLNAG LWQIIFGTPS VRAEEKASLE RARELLRFVN LDDQRNQLAR NLPYGDQRRL EIARALASSP KLILLDEPTA GMNPQETAEA TDLIRRLRDE LGITVVLIEH DMRVVMTISE RITVLDYGTK IAEGLPHEIR SNPRVIEAYL GKGAAAHGMV KVEGG
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