Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2973 |
Symbol | |
ID | 5209941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3724074 |
End bp | 3724625 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640596565 |
Product | hypothetical protein |
Protein accession | YP_001277287 |
Protein GI | 148657082 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA TCACCCCGGC AGTCTATTTT GCGGAAGTCG TGCCGCAGCG CTTCGCTGCA GCAGTTGCTG GCGCGTCAGA AGAGGTGCTG GCGCAGCCTG AGTTGACGGT GACCTACACG ATTGAAGGGG AGGGCGATCA GGGTGGCGTT TTTGGGTTGA AAGTTTCGGG CGGGTCGATT GAATTCGTCG ATGGCGGCAT CGAAAATGCC GATCTGCAAC TCGTGATGAC CTACGACAAC TGGCGTTCTG TGGCGGAGGG GGATGCCGTC GAGCCATTTA TCGACTATTT CCTCCGTCGC AAGGTCGAGA TCGTGAAGAA TCTGCGCGGG ATGGTCAAAC TCGAGTTGAC CCGCTCCGAC GAGAGTTTGT TTGAGAGCGT CAGCATCTTT GGCGGTCAAT CCGAGCCGTC GGTGACGCTG CGGATGACGA CGGATGATTA CCGACAGATG CTTTCGGGCG AGTTGAACGG GCAGATGGCG TTTATGACGG GGAAATTGCG GTTTGAGGGC AGCCTGCCGC TGTTGATGCA GATCGGTGCG CTGAGCGGCT AG
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Protein sequence | MSDITPAVYF AEVVPQRFAA AVAGASEEVL AQPELTVTYT IEGEGDQGGV FGLKVSGGSI EFVDGGIENA DLQLVMTYDN WRSVAEGDAV EPFIDYFLRR KVEIVKNLRG MVKLELTRSD ESLFESVSIF GGQSEPSVTL RMTTDDYRQM LSGELNGQMA FMTGKLRFEG SLPLLMQIGA LSG
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