Gene RoseRS_2973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2973 
Symbol 
ID5209941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3724074 
End bp3724625 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID640596565 
Producthypothetical protein 
Protein accessionYP_001277287 
Protein GI148657082 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA TCACCCCGGC AGTCTATTTT GCGGAAGTCG TGCCGCAGCG CTTCGCTGCA 
GCAGTTGCTG GCGCGTCAGA AGAGGTGCTG GCGCAGCCTG AGTTGACGGT GACCTACACG
ATTGAAGGGG AGGGCGATCA GGGTGGCGTT TTTGGGTTGA AAGTTTCGGG CGGGTCGATT
GAATTCGTCG ATGGCGGCAT CGAAAATGCC GATCTGCAAC TCGTGATGAC CTACGACAAC
TGGCGTTCTG TGGCGGAGGG GGATGCCGTC GAGCCATTTA TCGACTATTT CCTCCGTCGC
AAGGTCGAGA TCGTGAAGAA TCTGCGCGGG ATGGTCAAAC TCGAGTTGAC CCGCTCCGAC
GAGAGTTTGT TTGAGAGCGT CAGCATCTTT GGCGGTCAAT CCGAGCCGTC GGTGACGCTG
CGGATGACGA CGGATGATTA CCGACAGATG CTTTCGGGCG AGTTGAACGG GCAGATGGCG
TTTATGACGG GGAAATTGCG GTTTGAGGGC AGCCTGCCGC TGTTGATGCA GATCGGTGCG
CTGAGCGGCT AG
 
Protein sequence
MSDITPAVYF AEVVPQRFAA AVAGASEEVL AQPELTVTYT IEGEGDQGGV FGLKVSGGSI 
EFVDGGIENA DLQLVMTYDN WRSVAEGDAV EPFIDYFLRR KVEIVKNLRG MVKLELTRSD
ESLFESVSIF GGQSEPSVTL RMTTDDYRQM LSGELNGQMA FMTGKLRFEG SLPLLMQIGA
LSG