Gene RoseRS_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2959 
Symbol 
ID5209927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3700954 
End bp3703794 
Gene Length2841 bp 
Protein Length946 aa 
Translation table11 
GC content61% 
IMG OID640596552 
Producthypothetical protein 
Protein accessionYP_001277274 
Protein GI148657069 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.941991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGAGTA AAACGATTTC GGGCGATCCA CCTGCCTGGC AGCCGTCCGC TGGCACGTAT 
GCGCAGATGG TGCTGCATTA TCTGGATATG CGCCTGGCGC TGATCATCGC GCTGGCGGTG
CTGGCTGGCA TCTTCGCGTA TCAGGCGCCG GTCAATACGA CGATTCTCGT CGGTTGGCCC
GGCGACCGCT TGTTTTTGCA GGCGAGCGAG GGCGCTGGCG CTGCGGATCG CTACACGTTC
TATGGGGACG AACTCACCGC AGACGCACAA AGTGGACGGA GTCGCTGGAC GCACCAGGGG
GCGCGGGTCG ATCTGGCTGG TCTGGGAGAA GGCGCGCTCG TTGTGACGGT GCGCGCTCAG
GGTTGGCCCG CCGATGCACT GAACAGCGTG ACGCGCCAAC CGGAGGTGAT CGTTGCAACC
CATGATGCGC CGATCGGTCG ATTCACCCCT GATGAGCGAT GGGCGGAGTA TGAGTTTGCC
ATCCCGGTCG AGGCGCGTCG CGGCGCCGAC CTGATATTGA CGTTCACCGC CTCGGACGTT
TTCACCAGCA CAAGTGTCTA CACCGATCCG CGGCCCAAAG GGGTTCGGAT CGAATCGATC
AGCGTGCGCA GCGCCAGCGA TGGTCCGTTC ATGCCGGTTG TTGCGCCGGT GTTCTGGCTG
GCGGTGAATG GCGTCGTCTG GTTCCTGGCG CTTGCCGCAC TCACGCGCCG ACCGACAGGC
GCCTTTGTTG TCGCTACGTT GCTGGTCAGC GGGGCAGCGG TTGCTCTGGC AGCGTTGCGT
ATCTGGGCGG TTGCGTTGCT GCCGTGGTTC GCCGGTATTG GCGCTGTTCC GCTGATCTGG
CAGTACCGTG CGCTGCTCAC AAGATACCCC TTGCGGTTGA TACGCCGCTT TGCGCGTGGT
GCATCTCTTG GGTATGGGTT GCTCGGCGCG GTTGCCGTGT GGCTGATGGC GATGGTGACG
CTTTACGCTC CTCCATTGCC GCGTCCGGAG TGGTTCTGGG AGTTTTTTCC GGACTCGCTG
GTCTCTACCC TGATCATTGC TGGCGTTCTG GCGCTGATAC TCATCTATGG TCACAACGGT
TTACCGCGTC TCGTCCAGAA TACGGTGGAT GCTATCGGTT CGCAACGAGG AGCGGCATTG
CTGCTGGCGC TGATGCTGGC GGTATGGGTC GGGTATCTGG GATCGGTCAT CATGGCACTG
CCGTATGTCG GTCATGCCGA TTATGCGGAT AATGCGGTCG TGGCGCGCAA TCTGCTCGCC
GGTCGCGGAT GGACGGTCGA TTATGTGACG CAGTTCTACT ATCTCTATGA TGGCGTCACG
CGCCCGCAGG AGACCTGGCC CCTGCTCCAA CCGGTGTGGG TGGCGTTCTC GTTTGCGGTG
TTCGGTGTCA GCGCATGGGC GGCGAAAGTT CCCAATCTGC TGTTCATGAC GCTGCTGGCG
CTGGCGGTCT ACCGTGCTGG TGCGCGCCTG TGGGATCGAC GCGTCGGACT GGTCGCCGTT
GTGTTGCTGA TCACCAGTCA CCTCTATTTC AAACTGGTGA TCTATGTGAC GAATGACCTG
GGATTTGCGC TGTTTACGTT TGGGGCGCTG ATCGCGCTGT ACCGCGCCTG GGGTGCGCCG
CAGGCGGGTA TGTCTGCGCG AAAGGTTGCG CTTCTGACCG CCGTTTCTGG TGCGTTGACC
GGACTCATGC TGCTTCAGAA GCCGGGAAGC GGCGGGTTGA TCGCGTTGGG AATGGGGTTG
TGGTTCCTGT GGGTGCGCTT CGACGCGCTG CCGCGAACCA TGGCAGACCT GCGCGTGCGT
CTTGCCCCGG TTGTCGGGTG GAGTGTTGTT GCTTTTGCGT TACTCTCCCC CTACCTGGCG
CGGAATATGC TCACCTTCGG CGTGCCGTTC TATTCAACCG AAAGCAAAGA TGCATGGGTG
TTGGAGTATA CGACGTGGGA TCAGATCTAT GCGGTGTATA CCTCTGAGGA AGGGTTGAGC
ACGCTGGGTG TTCCGGATCG AAGCTGGATT CTGCGCTGGG GATTTGACCG CACCCTGGTG
AAACTGGAGC GTCAGGTTCA GGCATTGCGC GATTATCTGA TCCCTTCCTG GGAGCGTGCT
CCGTTTGGGA TGGGCGAGTG GTTCGGGCGC GCCGACAAGA GGCGTTTGTT GTTTGAGGCG
GGCGCGTGGC TGGCGCTTTT TGGCGCCGTT GGCGCTGCGG TCGCTCACCG CCGCCTGATA
ATGCTTCTTT GCGCTGCTTT TGTGCCATAT ACTCTGTTTC TGATCGTCTA CTGGCACACG
AACGAAGAGC GCTACTGGGT TGTGATCATG CCGTGGCTGG CGCTCTTTGC CGCTGCTGCG
ATCTGGCGCA TCTACGATAG AATTGCCAGG ATCTCCAACC GGCGATGGGC GCCGTTCGGG
TTGATGGCAG TTGTCGCGTT GACTGCGGCT ATCATTGTCC CTTCGTGGCC CGAAATCGCC
GAAAAGGTGC GCGATGAACC TCACCTCTAC CGCGCCGATC TCGACGCTTA TGCCTGGTTG
CAGCGTTCTA CGCCGCCCGA TGCGGTCGTT ATGACGCGCA ATCCGTGGCA ACTCAACTGG
CATAGCGAGC GTCCGGCGCT GATGATTCCA TACACAACCG ATCAGGAGAC GTTCCTGCGC
CTGGCGCGCC ACTACCGTGT GCGGTACCTG GTGCTCGATA CGTTGCAGCG TCCGGCGCCA
GAGGTGCGAC GGATGCTTGA TGCAATGATT GCCGACCCGC ACCTGGGTTT CCGTGAAGTC
TATCGCACAC CGACGTACCG CGCCGATTTC CGGGGTGTGA CGAAGGAGTT GACCGCAGTG
GTGTACGCAT TCCCGGAGTA A
 
Protein sequence
MRSKTISGDP PAWQPSAGTY AQMVLHYLDM RLALIIALAV LAGIFAYQAP VNTTILVGWP 
GDRLFLQASE GAGAADRYTF YGDELTADAQ SGRSRWTHQG ARVDLAGLGE GALVVTVRAQ
GWPADALNSV TRQPEVIVAT HDAPIGRFTP DERWAEYEFA IPVEARRGAD LILTFTASDV
FTSTSVYTDP RPKGVRIESI SVRSASDGPF MPVVAPVFWL AVNGVVWFLA LAALTRRPTG
AFVVATLLVS GAAVALAALR IWAVALLPWF AGIGAVPLIW QYRALLTRYP LRLIRRFARG
ASLGYGLLGA VAVWLMAMVT LYAPPLPRPE WFWEFFPDSL VSTLIIAGVL ALILIYGHNG
LPRLVQNTVD AIGSQRGAAL LLALMLAVWV GYLGSVIMAL PYVGHADYAD NAVVARNLLA
GRGWTVDYVT QFYYLYDGVT RPQETWPLLQ PVWVAFSFAV FGVSAWAAKV PNLLFMTLLA
LAVYRAGARL WDRRVGLVAV VLLITSHLYF KLVIYVTNDL GFALFTFGAL IALYRAWGAP
QAGMSARKVA LLTAVSGALT GLMLLQKPGS GGLIALGMGL WFLWVRFDAL PRTMADLRVR
LAPVVGWSVV AFALLSPYLA RNMLTFGVPF YSTESKDAWV LEYTTWDQIY AVYTSEEGLS
TLGVPDRSWI LRWGFDRTLV KLERQVQALR DYLIPSWERA PFGMGEWFGR ADKRRLLFEA
GAWLALFGAV GAAVAHRRLI MLLCAAFVPY TLFLIVYWHT NEERYWVVIM PWLALFAAAA
IWRIYDRIAR ISNRRWAPFG LMAVVALTAA IIVPSWPEIA EKVRDEPHLY RADLDAYAWL
QRSTPPDAVV MTRNPWQLNW HSERPALMIP YTTDQETFLR LARHYRVRYL VLDTLQRPAP
EVRRMLDAMI ADPHLGFREV YRTPTYRADF RGVTKELTAV VYAFPE