Gene RoseRS_2947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2947 
SymbolgatA 
ID5209915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3687409 
End bp3688872 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content63% 
IMG OID640596540 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001277262 
Protein GI148657057 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGC TCCACCAGTT GACGCTTTCC GATGCGCGTG AGGCGCTGAT GCGCGGTGAG 
ATCACATCGG TCGAGTTGAC CGATGCGCTG CTGGCGCGGA TTGCCGCTGT CGAACCGCAG
GTGCGCGCGT TTCTGACCAT CGACGCTGAA GGTGCGCGGG CGCAGGCGCA GGCTGCCGAT
GCGCGTCGCG CCGCTGGCGA TACATCGCCG TTGCTCGGCA TTCCGCTTGG CATCAAGGAT
GTCATTTCGA CGCAGGGGGT GCGCACCACC TGCGCCTCGA AGATGCTCGA AAACTATGTT
CCGGTGTACG ACGCAACGGC TGTTGCGCGC TTGAAAGCAG CTGGCGCGGT GCTGATCGGC
AAACTCAACT GTGATGAGTT TGCGATGGGT TCCTCGACCG AGAATAGCGC ATTTCAGCAG
ACGCGCAACC CCTGGAATCT GGAACGGGTT CCCGGCGGTT CATCCGGCGG TTCGGCAGCG
GCTGTGGCTG CCGGTGAGGC GCCGGCAACC CTCGGCACCG ATACCGGCGG TTCGATCCGT
CAACCGGCGG CGCTGTGCGG CATTACCGGT CTCAAGCCGA CCTATGGGCG CGTGTCACGT
TATGGTCTAG TAGCGTTCGC CTCGTCGCTC GATCAGATCG GACCGATGGC GCGCACGGTG
CGCGATTGTG CAATAATTCT GCGGGTTATT GCGGGCGCCG ATCCGTTCGA TGCAACCTGT
ACCGATCACC CGGTTCCAGA TTATGAGGCG GCGCTGACCG GCGACATTCG CGGGTTGCGC
ATTGGCGTTC CGCGTGAGTA CTTCGTTGCC GGTATGCAAC CGGAGGTTGA ATCTGCCGTG
CGCGTCGCCA TTGATGTGTT GCGCGACCAG GGCGCGGAAG TGCGCGAGAT CAGTCTGCCG
CACACCCCCT ACGCGCTGCC GGTCTACTAT CTGATCGCTC CGGCGGAAGC CAGCGCCAAT
CTTGCGCGTT TCGACGGTGT GCGGTATGGG TTGCGCGTGC CGGGCGAGAG TTACTTCGAT
GAACTAGAGC GCACCCGTGG CGCAGGGTTC GGTCCAGAGG TGCGACGGCG GATTATGCTG
GGAACGTATG CGCTCTCAGC GGGGTACTAT GATGCCTACT ACAAACGCGC CCAACAGGTG
CGCACCCTCA TCCGGCGCGA CTATCAGCAG GCATTCGAGC AGGTCGATGT CATTGCCGCC
CCAACCACGC CGACGGTCGC CTTCCCGATT GGGGCGCACT CCGATGACCC ACTGGCAATG
TACCTCGAGG ATGTCTGCAC GCTGCCGTTG AATCTGGCAG GGTTGCCGGG GCTGGTTGTG
CCATGCGGGT TTGCGGCAGG GCTGCCGATC GGTCTGCAAC TGATCGGGCG AGCGTTCGAT
GAAGAGACGC TGCTGCGCAT CGGCGACGCC TATCAGCGTG TTACTGACTG GCATACGCGC
ATGCCGGATC TGCCGGTTGA GTAA
 
Protein sequence
MTLLHQLTLS DAREALMRGE ITSVELTDAL LARIAAVEPQ VRAFLTIDAE GARAQAQAAD 
ARRAAGDTSP LLGIPLGIKD VISTQGVRTT CASKMLENYV PVYDATAVAR LKAAGAVLIG
KLNCDEFAMG SSTENSAFQQ TRNPWNLERV PGGSSGGSAA AVAAGEAPAT LGTDTGGSIR
QPAALCGITG LKPTYGRVSR YGLVAFASSL DQIGPMARTV RDCAIILRVI AGADPFDATC
TDHPVPDYEA ALTGDIRGLR IGVPREYFVA GMQPEVESAV RVAIDVLRDQ GAEVREISLP
HTPYALPVYY LIAPAEASAN LARFDGVRYG LRVPGESYFD ELERTRGAGF GPEVRRRIML
GTYALSAGYY DAYYKRAQQV RTLIRRDYQQ AFEQVDVIAA PTTPTVAFPI GAHSDDPLAM
YLEDVCTLPL NLAGLPGLVV PCGFAAGLPI GLQLIGRAFD EETLLRIGDA YQRVTDWHTR
MPDLPVE