| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2928 |
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| Symbol | |
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| ID | 5209897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3664128 |
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| End bp | 3665732 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640596524 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001277246 |
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| Protein GI | 148657041 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCTCG AACAGAAGCC AGCTGCGATT GGTTCGGCGC AGACGACACA GGATCGCGGC
GCGATGGCGT GGCTCCAACG CCCATCGACA GCGCTTGCCC TGGTGTGCGC CGCCGTCTTT
CTCGGCGCCG TCGATCTGAC GATCGTGACC GCCGTGCTGC CGAAGATCAT GGTCGATCTG
AGCGTCTCGA TCGACACCGA ACTCCATCGC GCCTCATGGG TGATTACCGG CTACCTGCTG
GCATATACCA TCAGCATGAC CTTTACCGGG CGCCTGTCCG ACCTGTATGG ACGACGCATT
GCCTACCTGA TCTGTCTGAC CATCTTTACC CTCGGTTCGG TTGTGGTTGC TGTCGCACCC
GCGCTTGAAG AGGTCGTCCT GGGGCGGGTG GTGCAGGCGC TCGGCGCCGG GGCGCTGGTG
CCGATTTCGA TGGCGCTGGT GAGCGATCTC TTCCCGCCGG AGCGCCGCCC GGCGGCGCTG
GGGGTGATTG CCGCCGTCGA TACCGCTGGC TGGATGGTCG GGCATGTGTA TGGCGGTGCG
CTTATGCGTC TGTTCGATGA CTGGCGCCTG CTGTTCTGGA TCAATGTCCC ATTCGGCATG
ATTGCCCTGG CATTGACCTG GCTGGCGCTG CGGCGCGTGG TGATCACCCG CGCATCGGGC
AGTTTCGACT GGCGCGGCGC GGTGCTGATC TCGATCAGTC TGACGGCATT CAACATCGGG
ATAGGCGCAG GCGCAGAACT GGGACAGACC GATTTCTACG GCGAACGTCC CGGACCTCCG
CCCTATGCCT TGCCGCTGAC GCTGGCATCC CTTGTCGTCC TTGCAGCGTT CATCTGGGTC
GAACGCCGCG CGCGCGACCC GCTGCTGGAC CTGGCGCTGT TCCGGCAGCG CGGCACTGTT
GCGGCATCGA TCATGAATGT GCTGATCGGG TTCGTGCTGG CGCTGGCGAT TGCGAATGTG
CCGCTGTTCA TCAACACCCG CCTGGGGCTG CTCTACCCGA CTGACCCCGA CATCCTGCGG
CGAGGCGCAT GGGAGACCGG TCTGGTGCTT TCGGCGCTGA CGCTGGCGCT GGCACTGCTG
GCATGGCCCG GCGGTCGCCT GGCGGGACGG TTCGGCGACC GCCTTCCGGC GCTGATCGGG
CTGGGGGTGG CGACAGTCGG CTACCTGGTG ATGAGTCGCT GGCAATCCGA CACCGATTAC
TGGACGATGG TCGGGGGGTT GACGCTGGCG GGGTGCGGCG TGGGCATGGC GCTTGCGCCA
ACCGCTTCGA CGATCATCGC GGCTGCCGGA CCCGAACGGC GCGGCGCGGC GTCGGCGCTG
GTGATCATCC TGCGACTGAT CGGAATGACG GCGGGCGTTT CGACCCTGAC ACTGTGGGGC
GTGCAGCGAC AGGACGCGCT GCGACGCGCT GCGGACCCGG CATTGCTGGC AGACTTTGAT
CGGGTGCGGA TGTTTCTGAT CGATGTAGCC GCGCAGGTGG TGGGAGAGAC CTTCCTTTTT
GCAGTGGCCG CGTGCGCGAT TGCGCTCGTT GCAGCCATAT GGCTGCCGGG GCGTCACCGA
TCACAAACCG GAGAGACACG GGATGGGAGT CAGGTTGCCC GATAG
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| Protein sequence | MALEQKPAAI GSAQTTQDRG AMAWLQRPST ALALVCAAVF LGAVDLTIVT AVLPKIMVDL
SVSIDTELHR ASWVITGYLL AYTISMTFTG RLSDLYGRRI AYLICLTIFT LGSVVVAVAP
ALEEVVLGRV VQALGAGALV PISMALVSDL FPPERRPAAL GVIAAVDTAG WMVGHVYGGA
LMRLFDDWRL LFWINVPFGM IALALTWLAL RRVVITRASG SFDWRGAVLI SISLTAFNIG
IGAGAELGQT DFYGERPGPP PYALPLTLAS LVVLAAFIWV ERRARDPLLD LALFRQRGTV
AASIMNVLIG FVLALAIANV PLFINTRLGL LYPTDPDILR RGAWETGLVL SALTLALALL
AWPGGRLAGR FGDRLPALIG LGVATVGYLV MSRWQSDTDY WTMVGGLTLA GCGVGMALAP
TASTIIAAAG PERRGAASAL VIILRLIGMT AGVSTLTLWG VQRQDALRRA ADPALLADFD
RVRMFLIDVA AQVVGETFLF AVAACAIALV AAIWLPGRHR SQTGETRDGS QVAR
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