Gene RoseRS_2908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2908 
Symbol 
ID5209877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3636969 
End bp3638450 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content64% 
IMG OID640596504 
Productbiotin carboxylation domain-containing protein 
Protein accessionYP_001277226 
Protein GI148657021 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGGA CTCTTCTGGT TGCCAACCGT GGCGAAATTG CCGTTCGCAT CATACGCACC 
TGCCGCGACA TGGGCATTCG AACGGTCGCA CTCTATGACG ACACCGACCT CAGTTCGCTC
CACGTGCGCC TGGCTGATGC GTGCGTGCGT CTGAGTTCGG GCGCGATCTA TCACGATGCC
CCGGCGCTGG TTCAGATCGC GCGCGACTGC GGCGCGGACG CCATTCATCC CGGCTACGGC
TTTCTTGCCG AGCACGATGA GTTTGCGCGC GCATGCGAGG AAGCCGGGAT TGCGTTCATC
GGTCCGTCCA GCACAGCACT CGCGCGTGTG CGCGATAAGA TCGCCACGCT CGAAACCGTG
CGCGCTGCCG GTTTCGCTGT GCCACGCCAT TCACCGCAGG CATACCGCGC TTCTGAGTGG
GAGGCGCTGC GTGCCGCTGC CGGGCGACTC GGCTACCCGC TGGTGCTCAA GTCGTACAGT
GGCGGGCACG GTCACGGCAC GCGCCTGGTG CGTGAGCCAA CACACCTGGA GAGCATCGCG
CAGCATGCGC ATTCAGCGGC GCTGACTGCA TCCGGTGACG ACCGGCTCTA TCTGGAAGAA
GCGTTTCTCC CGGCGCGCTA TCTGGAAGTC CAGATCGTCG GCGACCGCTA CGGCAATCTG
GTGCATCTGG GCGAACGCGA TGGCACGATC CAGCACAACC ATCACAAGGT CGTGGCAGAG
TCGCCAGCGC CATACCTGAC CGATGCACAG CGCGAAGACC TGTGGCGGCA GGCGCTTGCG
ATCGGGCGTC TGCTGGGATG CTCCAACATC TGCACAATCG AATTCGTCCT CGATGCGCAG
GGACATGTCT ACTTCACCGA AGTCAAAACG CGGATTCAGG TCGAGCATCC AGTCACCGAA
ATGCGTACCG GTATCGACCT GGTACGCACG CAGATTCGGA TCGCTGCGGG CGAACCGCCT
GGCTTTTCGC AGGACGATGT CGCTCTGCGC GGATGCGCCA TCCAGGCGCG CATTAATGCA
GAGGATCCCT GGAACGATTA CCTGCCCAGC CCTGGGCGCC TGCGCCGGTT TCGCTTTCCG
GGCGGACCGG GCGTGCGCGT TGATACCTAC GCCTACGGCG GTTGCGATGT GCCGGTGCGC
TACGACCCGC TGCTGGCGAA GGTTATCGCC TGGGACGATA CGCGCGCAGG GGCGCTGCAA
CGGTTGCGCC GCGCAGTCGC CGATTTTGCG ATCAGCGGCG TGCAAACGAA CCTGCCGCTG
GTCCAGCGCA TCCTGGACAC ACCCGAATTT ACCGCTGGAA CGTATGACTC GGAATTCAAC
CGGCAACCCC TGCCGGGCGC TGAGGTTCCC GATGATCACC TCCGCGATCT GGCAGTTGCA
GCTGCACTGG CGTACCTCCG CCGGAGGAGT GACACCGCTG GCGCTCTCCC CAACCGCGCC
GGTTCTGGAT GGCACCGTGA TTCGCGCAGA TTGCCGCAAT AG
 
Protein sequence
MFRTLLVANR GEIAVRIIRT CRDMGIRTVA LYDDTDLSSL HVRLADACVR LSSGAIYHDA 
PALVQIARDC GADAIHPGYG FLAEHDEFAR ACEEAGIAFI GPSSTALARV RDKIATLETV
RAAGFAVPRH SPQAYRASEW EALRAAAGRL GYPLVLKSYS GGHGHGTRLV REPTHLESIA
QHAHSAALTA SGDDRLYLEE AFLPARYLEV QIVGDRYGNL VHLGERDGTI QHNHHKVVAE
SPAPYLTDAQ REDLWRQALA IGRLLGCSNI CTIEFVLDAQ GHVYFTEVKT RIQVEHPVTE
MRTGIDLVRT QIRIAAGEPP GFSQDDVALR GCAIQARINA EDPWNDYLPS PGRLRRFRFP
GGPGVRVDTY AYGGCDVPVR YDPLLAKVIA WDDTRAGALQ RLRRAVADFA ISGVQTNLPL
VQRILDTPEF TAGTYDSEFN RQPLPGAEVP DDHLRDLAVA AALAYLRRRS DTAGALPNRA
GSGWHRDSRR LPQ